BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76869at6073Duplicated602.4405.0amic_s0013.g69.t2FGFR1 oncogene partnerJBrowse
76873at6073Duplicated1790.71054.0amic_s0001.g64.t3Zinc finger MIZ domain-containing protein 1JBrowse
76873at6073Duplicated1739.31011.0amic_s0001.g64.t1Zinc finger MIZ domain-containing protein 1JBrowse
76873at6073Duplicated1736.11011.0amic_s0001.g64.t2Zinc finger MIZ domain-containing protein 1JBrowse
76877at6073Complete688.0467.0amic_s0021.g69.t1ankyrin repeat and LEM domain-containing protein 1JBrowse
76878at6073Fragmented546.2286.0amic_s0018.g192.t1signal peptide peptidase-like 3JBrowse
76879at6073Duplicated1298.2853.0amic_s0081.g73.t2leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1JBrowse
76879at6073Duplicated1236.3807.0amic_s0081.g73.t3leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1JBrowse
76879at6073Duplicated1200.2776.0amic_s0081.g73.t1leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1JBrowse
76889at6073Complete1422.21004.0amic_s0148.g2.t1testis-expressed protein 2JBrowse
76894at6073Complete851.6621.0amic_s0315.g23.t1serine/threonine-protein kinase unc-51JBrowse
76896at6073Complete551.9431.0amic_s0125.g30.t1protein tweety homolog 2-likeJBrowse
76901at6073Complete763.6552.0amic_s0014.g105.t1uncharacterized protein KIAA2013 homologJBrowse
76905at6073Complete464.3313.0amic_s0091.g9.t1zinc finger protein GLI2-likeJBrowse
76914at6073Fragmented251.8179.0amic_s0114.g45.t1E3 ubiquitin-protein ligase TRAIPJBrowse
76915at6073Complete1198.4811.0amic_s0173.g34.t1WD repeat-containing protein 47JBrowse
76922at6073Complete694.8337.0amic_s0088.g19.t3UBX domain-containing protein 1JBrowse
76925at6073Complete2333.11494.0amic_s0386.g19.t1uncharacterized protein LOC116302959JBrowse
76928at6073Complete325.2215.0amic_s0094.g31.t1E3 ubiquitin-protein ligase march2JBrowse
76929at6073Complete216.3165.0amic_s0004.g143.t1non-histone chromosomal protein 6JBrowse
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