BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77101at6073Complete1019.1662.0FUN_035852-T1eukaryotic translation initiation factor 2-alpha kinase 1JBrowse
77103at6073Complete995.0709.0FUN_015983-T2ribonucleases P/MRP protein subunit POP1-likeJBrowse
77114at6073Complete1349.2950.0FUN_009053-T1folliculin-interacting protein 1JBrowse
77115at6073Complete736.7432.0FUN_030655-T1DDB1- and CUL4-associated factor 5JBrowse
77134at6073Duplicated169.3114.0FUN_036810-T3nucleolar and coiled-body phosphoprotein 1JBrowse
77134at6073Duplicated166.1114.0FUN_036810-T1nucleolar and coiled-body phosphoprotein 1JBrowse
77137at6073Complete633.5413.0FUN_010639-T1peroxisomal membrane protein PEX13-likeJBrowse
77148at6073Complete817.2570.0FUN_012274-T1kinetochore protein NDC80 homologJBrowse
77163at6073Complete669.2448.0FUN_006651-T1coiled-coil domain-containing protein 138JBrowse
77166at6073Complete543.6384.0FUN_025663-T1forkhead box protein J3-likeJBrowse
77172at6073Fragmented284.6196.0FUN_036193-T1malonyl-CoA-acyl carrier protein transacylase, mitochondrialJBrowse
77177at6073Complete493.9323.0FUN_035638-T1HAUS augmin-like complex subunit 4JBrowse
77182at6073Complete352.1267.0FUN_044527-T1transcription initiation factor IIA subunit 1JBrowse
77184at6073Complete928.0567.0FUN_043539-T1transcriptional protein SWT1-likeJBrowse
77192at6073Complete402.8268.0FUN_040425-T1HAUS augmin-like complex subunit 1JBrowse
77195at6073Complete369.5317.0FUN_043484-T1WD40/YVTN repeat-like-containing domain superfamilyJBrowse
77199at6073Complete347.9207.0FUN_008098-T1reticulon-1-AJBrowse
77200at6073Complete656.9515.0FUN_008448-T1scaffold protein salvador-likeJBrowse
77208at6073Complete702.1449.0FUN_014609-T1ribonuclease IIIJBrowse
77217at6073Complete371.7252.0FUN_038203-T1ribosomal L1 domain-containing protein 1JBrowse
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