BUSCO Gene Details in Acropora cytherea

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora cythereaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.7% [S: 67.8%, D: 12.9%] F: 10.9%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,586 (80.7%)2,172 (67.8%)414 (12.9%)349 (10.9%)268 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora cytherea: 3,438 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76805at6073Fragmented326.8268.0acyt_s0148.g8.t2uncharacterized protein LOC130614738 isoform X1JBrowse
76820at6073Complete835.4457.0acyt_s0012.g112.t1pectin acetylesterase 5JBrowse
76835at6073Complete661.1465.0acyt_s0013.g124.t1RNA polymerase II-associated protein 3JBrowse
76836at6073Fragmented612.6505.0acyt_s0013.g5.t1general transcription factor 3C polypeptide 4JBrowse
76840at6073Complete655.3440.0acyt_s0019.g15.t1SHC-transforming protein 1JBrowse
76843at6073Duplicated419.4274.0acyt_s0101.g36.t2leucine-rich repeat-containing protein 59JBrowse
76843at6073Duplicated375.8235.0acyt_s0101.g36.t1leucine-rich repeat-containing protein 59JBrowse
76846at6073Complete2513.61656.0acyt_s0065.g24.t1gamma-tubulin complex component 6JBrowse
76853at6073Fragmented1249.5941.0acyt_s0049.g21.t1RB1-inducible coiled-coil protein 1JBrowse
76855at6073Complete498.5319.0acyt_s0032.g68.t1Protein kinase C and casein kinase substrate in neuronsJBrowse
76861at6073Complete693.0425.0acyt_s0069.g113.t1probable protein phosphatase 2C 21JBrowse
76864at6073Complete268.7206.0acyt_s0097.g140.t1meiotic recombination protein REC114JBrowse
76869at6073Duplicated610.1405.0acyt_s0108.g48.t2FGFR1 oncogene partnerJBrowse
76869at6073Duplicated602.7405.0acyt_s0108.g48.t1FGFR1 oncogene partnerJBrowse
76873at6073Duplicated1954.41115.0acyt_s0011.g8.t3Zinc finger MIZ domain-containing protein 1JBrowse
76873at6073Duplicated1901.51071.0acyt_s0011.g8.t2Zinc finger MIZ domain-containing protein 1JBrowse
76873at6073Duplicated1898.31071.0acyt_s0011.g8.t1Zinc finger MIZ domain-containing protein 1JBrowse
76877at6073Complete707.8481.0acyt_s0114.g44.t1ankyrin repeat and LEM domain-containing protein 1JBrowse
76878at6073Fragmented547.5286.0acyt_s0047.g57.t1signal peptide peptidase-like 3JBrowse
76879at6073Duplicated1294.9854.0acyt_s0077.g68.t2leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1JBrowse
Go to page: of 172 pages
TOP