BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77067at6073Complete646.3454.0aint_s0903.g6.t1protein Spindly-likeJBrowse
77068at6073Duplicated1949.51218.0aint_s0038.g30.t1kinesin-like protein 1 isoform X1JBrowse
77068at6073Duplicated1930.91218.0aint_s0038.g30.t2kinesin-like protein 1 isoform X1JBrowse
77076at6073Duplicated1560.4994.0aint_s0056.g19.t1leucine-rich repeat and coiled-coil domain-containing protein 1JBrowse
77076at6073Duplicated1559.4994.0aint_s0056.g19.t2leucine-rich repeat and coiled-coil domain-containing protein 1JBrowse
77078at6073Complete758.9430.0aint_s0232.g32.t1coiled-coil domain-containing protein 96JBrowse
77082at6073Complete432.6275.0aint_s0482.g5.t1uncharacterized protein LOC116292340JBrowse
77088at6073Complete1218.9786.0aint_s0010.g16.t12 -5 -oligoadenylate synthase 1JBrowse
77089at6073Complete1061.6868.0aint_s0001.g85.t1X-linked retinitis pigmentosa GTPase regulator-likeJBrowse
77093at6073Complete295.4180.0aint_s0087.g8.t1tetratricopeptide repeat protein 33JBrowse
77095at6073Complete697.9433.0aint_s0322.g10.t1DNA cross-link repair 1AJBrowse
77101at6073Complete1023.8662.0aint_s0146.g2.t1eukaryotic translation initiation factor 2-alpha kinase 1JBrowse
77103at6073Duplicated945.1679.0aint_s0403.g23.t2ribonucleases P/MRP protein subunit POP1-likeJBrowse
77103at6073Duplicated936.5679.0aint_s0403.g23.t1ribonucleases P/MRP protein subunit POP1-likeJBrowse
77114at6073Duplicated1437.2970.0aint_s0629.g8.t3folliculin-interacting protein 1JBrowse
77114at6073Duplicated1383.9970.0aint_s0629.g8.t1folliculin-interacting protein 1JBrowse
77114at6073Duplicated1383.9970.0aint_s0629.g8.t2folliculin-interacting protein 1JBrowse
77115at6073Complete740.7469.0aint_s0016.g14.t1DDB1- and CUL4-associated factor 5JBrowse
77134at6073Complete158.8114.0aint_s0012.g96.t1nucleolar and coiled-body phosphoprotein 1JBrowse
77137at6073Complete627.0413.0aint_s0286.g24.t1peroxisomal membrane protein PEX13-likeJBrowse
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