BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76930at6073Complete982.3722.0amic_s0065.g68.t1DNA replication factor Cdt1JBrowse
76935at6073Complete219.8160.0amic_s0142.g18.t1uncharacterized protein LOC110236280 isoform X1JBrowse
76938at6073Complete747.9456.0amic_s0143.g27.t1ELMO domain-containing protein 3JBrowse
76943at6073Complete280.6161.0amic_s0169.g36.t1Zinc finger MYND domain-containing protein 11JBrowse
76945at6073Duplicated392.0247.0amic_s0250.g23.t2Kv channel-interacting 1JBrowse
76945at6073Duplicated378.5218.0amic_s0250.g23.t1Kv channel-interacting 1JBrowse
76948at6073Complete527.2360.0amic_s0161.g47.t1coiled-coil domain-containing protein 92JBrowse
76966at6073Duplicated412.7286.0amic_s0321.g5.t2E2F-associated phosphoprotein-likeJBrowse
76966at6073Duplicated403.0286.0amic_s0321.g5.t1E2F-associated phosphoprotein-likeJBrowse
76990at6073Complete816.8589.0amic_s0024.g15.t1U3 small nucleolar RNA-associated protein 14 AJBrowse
76992at6073Complete700.7438.0amic_s0012.g36.t1glycerate kinase-likeJBrowse
76993at6073Fragmented481.2377.0amic_s0131.g27.t1afadin- and alpha-actinin-binding protein B-likeJBrowse
77005at6073Complete518.9345.0amic_s0127.g21.t1thioredoxin domain-containing protein 5JBrowse
77006at6073Complete515.5284.0amic_s0381.g8.t1UbiA prenyltransferase domain-containing protein 1JBrowse
77014at6073Complete427.5279.0amic_s0100.g18.t1leucine-rich repeat-containing protein 40-likeJBrowse
77026at6073Complete1294.2806.0amic_s0002.g209.t1radial spoke head 10 homolog B-likeJBrowse
77034at6073Complete1928.71695.0amic_s0125.g8.t1putative leucine-rich repeat-containing protein DDB_G0290503JBrowse
77036at6073Complete465.8292.0amic_s0138.g29.t1Vacuolar protein sorting-associated protein 72JBrowse
77038at6073Complete1990.71300.0amic_s0002.g147.t1enhancer of mRNA-decapping protein 4JBrowse
77045at6073Complete388.9273.0amic_s0018.g118.t1E3 ubiquitin-protein ligase rnf146JBrowse
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