BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77220at6073Complete326.2230.0FUN_035862-T1uncharacterized protein LOC114517244JBrowse
77225at6073Complete3160.82160.0FUN_042851-T2abnormal spindle-like microcephaly-associated proteinJBrowse
77227at6073Complete757.8443.0FUN_021937-T1ETS translocation variant 1JBrowse
77228at6073Complete385.0284.0FUN_042606-T1transcription factor AP-1-likeJBrowse
77240at6073Complete972.3688.0FUN_001943-T1protein PAT1 homolog 1JBrowse
77246at6073Complete462.9361.0FUN_010623-T1Stromal membrane-associated protein 1JBrowse
77250at6073Duplicated1170.5805.0FUN_014456-T1rab GTPase-binding effector protein 1JBrowse
77250at6073Duplicated1036.8713.0FUN_014456-T2rab GTPase-binding effector protein 1JBrowse
77264at6073Complete1082.2756.0FUN_034920-T1RNA-binding protein 28JBrowse
77273at6073Complete2529.21559.0FUN_012139-T1androglobin-likeJBrowse
77285at6073Complete169.6110.0FUN_036159-T139S ribosomal protein L52, mitochondrial-likeJBrowse
77287at6073Duplicated189.6151.0FUN_033308-T2uncharacterized protein LOC110238137JBrowse
77287at6073Duplicated188.9151.0FUN_033308-T1uncharacterized protein LOC110238137JBrowse
77288at6073Complete666.1453.0FUN_008238-T1TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6LJBrowse
77294at6073Complete1248.0733.0FUN_016400-T1Serine/threonine-protein phosphatase 4 regulatory subunit 4JBrowse
77312at6073Complete826.3463.0FUN_028955-T2probable ATP-dependent RNA helicase DDX20JBrowse
77313at6073Complete1188.4812.0FUN_038833-T1axin-1JBrowse
77318at6073Duplicated433.1289.0FUN_023954-T1FACT complex subunit SSRP1-likeJBrowse
77318at6073Duplicated389.6262.0FUN_023954-T2FACT complex subunit SSRP1-likeJBrowse
77333at6073Complete1026.4695.0FUN_042969-T1anaphase-promoting complex subunit 5JBrowse
Go to page: of 168 pages
TOP