BUSCO Gene Details in Acropora echinata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora echinataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.0% [S: 66.3%, D: 12.6%] F: 12.4%, M: 8.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,530 (79.0%)2,125 (66.3%)405 (12.6%)397 (12.4%)276 (8.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora echinata: 3,435 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77006at6073Complete516.4285.0aech_s0214.g3.t1UbiA prenyltransferase domain-containing protein 1JBrowse
77014at6073Complete424.5278.0aech_s0019.g127.t1leucine-rich repeat-containing protein 40-likeJBrowse
77026at6073Complete1291.2796.0aech_s0004.g158.t1radial spoke head 10 homolog B-likeJBrowse
77034at6073Complete1587.41390.0aech_s0023.g161.t1putative leucine-rich repeat-containing protein DDB_G0290503JBrowse
77036at6073Complete465.8292.0aech_s0169.g19.t1Vacuolar protein sorting-associated protein 72JBrowse
77038at6073Complete1974.91300.0aech_s0004.g103.t1enhancer of mRNA-decapping protein 4JBrowse
77045at6073Complete388.6273.0aech_s0011.g114.t1E3 ubiquitin-protein ligase rnf146JBrowse
77068at6073Complete1874.91203.0aech_s0104.g34.t1kinesin-like protein 1 isoform X1JBrowse
77076at6073Duplicated1554.9995.0aech_s0115.g62.t1leucine-rich repeat and coiled-coil domain-containing protein 1JBrowse
77076at6073Duplicated1553.8995.0aech_s0115.g62.t2leucine-rich repeat and coiled-coil domain-containing protein 1JBrowse
77078at6073Complete756.1428.0aech_s0131.g29.t1coiled-coil domain-containing protein 96JBrowse
77082at6073Complete432.6275.0aech_s0007.g83.t1uncharacterized protein LOC116292340JBrowse
77087at6073Complete585.7394.0aech_s0021.g213.t1DNA-directed RNA polymerase III subunit RPC4JBrowse
77088at6073Complete1236.5786.0aech_s0011.g84.t12 -5 -oligoadenylate synthase 1JBrowse
77089at6073Complete880.9797.0aech_s0003.g544.t1X-linked retinitis pigmentosa GTPase regulator-likeJBrowse
77092at6073Fragmented450.0320.0aech_s0092.g38.t1nucleotide exchange factor SIL1JBrowse
77093at6073Complete296.4180.0aech_s0009.g272.t1tetratricopeptide repeat protein 33JBrowse
77095at6073Fragmented197.8314.0aech_s0056.g68.t1DNA cross-link repair 1AJBrowse
77101at6073Complete1028.3662.0aech_s0004.g123.t1eukaryotic translation initiation factor 2-alpha kinase 1JBrowse
77114at6073Complete1309.7924.0aech_s0094.g16.t1folliculin-interacting protein 1JBrowse
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