BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77240at6073Duplicated1077.8777.0aint_s0132.g28.t1protein PAT1 homolog 1JBrowse
77240at6073Duplicated1070.3777.0aint_s0132.g28.t2protein PAT1 homolog 1JBrowse
77246at6073Complete464.2361.0aint_s0286.g8.t1Stromal membrane-associated protein 1JBrowse
77250at6073Complete1131.3760.0aint_s0169.g14.t1rab GTPase-binding effector protein 1JBrowse
77264at6073Complete1083.9756.0aint_s0047.g27.t1RNA-binding protein 28JBrowse
77273at6073Complete2539.91559.0aint_s0251.g9.t1androglobin-likeJBrowse
77285at6073Complete170.0110.0aint_s0076.g13.t139S ribosomal protein L52, mitochondrial-likeJBrowse
77287at6073Complete190.2151.0aint_s0127.g4.t1uncharacterized protein LOC110238137JBrowse
77288at6073Complete664.5453.0aint_s0003.g36.t1TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6LJBrowse
77294at6073Complete1248.0734.0aint_s0025.g60.t1Serine/threonine-protein phosphatase 4 regulatory subunit 4JBrowse
77307at6073Complete1041.4688.0aint_s0292.g12.t1uncharacterized protein LOC116295007JBrowse
77312at6073Complete826.5448.0aint_s0192.g44.t1probable ATP-dependent RNA helicase DDX20JBrowse
77313at6073Complete1193.9812.0aint_s0288.g2.t1axin-1JBrowse
77318at6073Complete550.3292.0aint_s0026.g75.t1FACT complex subunit SSRP1-likeJBrowse
77333at6073Complete1030.4695.0aint_s0011.g50.t1anaphase-promoting complex subunit 5JBrowse
77334at6073Complete383.3249.0aint_s0113.g27.t1disks large-associated protein 1-likeJBrowse
77344at6073Complete409.4296.0aint_s0071.g35.t1thioredoxin domain-containing protein 15JBrowse
77345at6073Complete684.6503.0aint_s0146.g66.t1inositol-pentakisphosphate 2-kinaseJBrowse
77346at6073Complete391.0334.0aint_s0041.g47.t1protein phosphatase 1 regulatory subunit 12A-likeJBrowse
77348at6073Fragmented167.1132.0aint_s0070.g99.t1sodium/potassium-transporting ATPase subunit beta-1-likeJBrowse
Go to page: of 170 pages
TOP