BUSCO Gene Details in Acropora cytherea

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora cythereaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.7% [S: 67.8%, D: 12.9%] F: 10.9%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,586 (80.7%)2,172 (67.8%)414 (12.9%)349 (10.9%)268 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora cytherea: 3,438 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77089at6073Complete1071.2844.0acyt_s0022.g155.t1X-linked retinitis pigmentosa GTPase regulator-likeJBrowse
77092at6073Complete629.9424.0acyt_s0037.g34.t1nucleotide exchange factor SIL1JBrowse
77093at6073Complete293.9180.0acyt_s0003.g247.t1tetratricopeptide repeat protein 33JBrowse
77095at6073Complete697.5433.0acyt_s0016.g54.t1DNA cross-link repair 1AJBrowse
77101at6073Complete921.5583.0acyt_s0951.g1.t1eukaryotic translation initiation factor 2-alpha kinase 1JBrowse
77114at6073Duplicated1352.8950.0acyt_s0419.g5.t1folliculin-interacting protein 1JBrowse
77114at6073Duplicated1338.6941.0acyt_s0419.g5.t2folliculin-interacting protein 1JBrowse
77115at6073Complete736.5432.0acyt_s0176.g29.t1DDB1- and CUL4-associated factor 5JBrowse
77134at6073Duplicated168.1113.0acyt_s0009.g6.t1nucleolar and coiled-body phosphoprotein 1JBrowse
77134at6073Duplicated165.4113.0acyt_s0009.g6.t2nucleolar and coiled-body phosphoprotein 1JBrowse
77137at6073Complete632.6413.0acyt_s0113.g48.t1peroxisomal membrane protein PEX13-likeJBrowse
77148at6073Fragmented496.5396.0acyt_s0005.g169.t1kinetochore protein NDC80 homologJBrowse
77163at6073Complete675.3448.0acyt_s0012.g158.t1coiled-coil domain-containing protein 138JBrowse
77166at6073Complete567.3410.0acyt_s0236.g23.t1forkhead box protein J3-likeJBrowse
77171at6073Complete401.9287.0acyt_s0045.g91.t1transcriptional regulator Myc-1-likeJBrowse
77172at6073Complete420.0289.0acyt_s0063.g39.t1malonyl-CoA-acyl carrier protein transacylase, mitochondrialJBrowse
77177at6073Fragmented230.3138.0acyt_s0085.g60.t1HAUS augmin-like complex subunit 4JBrowse
77182at6073Complete352.4267.0acyt_s0010.g117.t1transcription initiation factor IIA subunit 1JBrowse
77184at6073Complete927.6568.0acyt_s0009.g160.t1transcriptional protein SWT1-likeJBrowse
77192at6073Fragmented241.6173.0acyt_s0016.g93.t1HAUS augmin-like complex subunit 1JBrowse
Go to page: of 172 pages
TOP