BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77354at6073Complete214.7155.0aint_s0055.g41.t1zinc finger HIT domain-containing protein 3JBrowse
77372at6073Complete510.4367.0aint_s0072.g59.t1crossover junction endonuclease eme1JBrowse
77381at6073Complete1049.3761.0aint_s0144.g3.t1coiled-coil domain-containing protein 186JBrowse
77382at6073Complete299.9230.0aint_s0570.g5.t1eukaryotic translation initiation factor 3 subunit JJBrowse
77383at6073Duplicated465.8305.0aint_s0116.g39.t1probable rRNA-processing protein EBP2JBrowse
77383at6073Duplicated402.8257.0aint_s0116.g39.t2probable rRNA-processing protein EBP2JBrowse
77385at6073Complete678.3409.0aint_s0044.g50.t1TBC1 domain family member 15JBrowse
77386at6073Duplicated299.1283.0aint_s0241.g3.t1G kinase-anchoring protein 1JBrowse
77386at6073Duplicated298.8283.0aint_s0241.g3.t2G kinase-anchoring protein 1JBrowse
77389at6073Fragmented551.9451.0aint_s0057.g44.t1Peroxisome proliferator-activated receptor gamma coactivator-related 1JBrowse
77391at6073Complete1224.1518.0aint_s0019.g51.t4Cleavage stimulation factor subunit 2JBrowse
77400at6073Duplicated464.8354.0aint_s0443.g21.t2forkhead box protein P1-likeJBrowse
77400at6073Duplicated464.7354.0aint_s0443.g21.t1forkhead box protein P1-likeJBrowse
77400at6073Duplicated464.6354.0aint_s0443.g21.t3forkhead box protein P1-likeJBrowse
77410at6073Complete951.5803.0aint_s0292.g2.t1nuclear exosome regulator NRDE2JBrowse
77414at6073Fragmented412.5265.0aint_s0237.g21.t1Myelin expression factor 2JBrowse
77415at6073Complete384.9254.0aint_s0157.g3.t1ELL-associated factor 1JBrowse
77417at6073Complete552.5454.0aint_s0054.g53.t1BICD family-like cargo adapter 1JBrowse
77426at6073Duplicated1180.5684.0aint_s0029.g85.t1enhancer of polycomb homolog 1JBrowse
77426at6073Duplicated1178.9684.0aint_s0029.g85.t2enhancer of polycomb homolog 1JBrowse
Go to page: of 170 pages
TOP