BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77348at6073Fragmented168.1132.0amic_s0023.g79.t1sodium/potassium-transporting ATPase subunit beta-1-likeJBrowse
77372at6073Complete519.7368.0amic_s0008.g90.t1crossover junction endonuclease eme1JBrowse
77381at6073Fragmented691.4553.0amic_s0067.g87.t1coiled-coil domain-containing protein 186JBrowse
77382at6073Complete302.8230.0amic_s0401.g5.t1eukaryotic translation initiation factor 3 subunit JJBrowse
77383at6073Complete464.7308.0amic_s0010.g86.t1probable rRNA-processing protein EBP2JBrowse
77385at6073Complete761.9446.0amic_s0080.g41.t1TBC1 domain family member 15JBrowse
77386at6073Duplicated236.5248.0amic_s0142.g27.t1G kinase-anchoring protein 1JBrowse
77386at6073Duplicated236.2248.0amic_s0142.g27.t2G kinase-anchoring protein 1JBrowse
77389at6073Complete646.2519.0amic_s0280.g14.t1Peroxisome proliferator-activated receptor gamma coactivator-related 1JBrowse
77391at6073Complete838.4531.0amic_s0024.g78.t1Cleavage stimulation factor subunit 2JBrowse
77400at6073Duplicated463.9354.0amic_s0040.g152.t3forkhead box protein P1-likeJBrowse
77400at6073Duplicated463.8354.0amic_s0040.g152.t1forkhead box protein P1-likeJBrowse
77400at6073Duplicated463.8354.0amic_s0040.g152.t2forkhead box protein P1-likeJBrowse
77410at6073Complete1295.1976.0amic_s0070.g108.t1nuclear exosome regulator NRDE2JBrowse
77414at6073Complete606.8411.0amic_s0056.g6.t1Myelin expression factor 2JBrowse
77415at6073Complete381.6254.0amic_s0197.g39.t1ELL-associated factor 1JBrowse
77417at6073Complete555.8452.0amic_s0161.g19.t1BICD family-like cargo adapter 1JBrowse
77426at6073Duplicated1185.5684.0amic_s0009.g82.t2enhancer of polycomb homolog 1JBrowse
77426at6073Duplicated1184.0684.0amic_s0009.g82.t1enhancer of polycomb homolog 1JBrowse
77435at6073Complete460.8333.0amic_s0161.g17.t1nuclear cap-binding protein subunit 3JBrowse
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