BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77566at6073Complete458.9319.0aint_s0290.g24.t1BUD13 homologJBrowse
77568at6073Duplicated498.4267.0aint_s0246.g15.t2Krueppel-like factor 3JBrowse
77568at6073Duplicated490.3264.0aint_s0246.g15.t1Krueppel-like factor 3JBrowse
77571at6073Complete1338.0919.0aint_s0027.g10.t1ELKS/Rab6-interacting/CAST family member 1JBrowse
77584at6073Duplicated1055.8706.0aint_s0299.g9.t1prominin-1-AJBrowse
77584at6073Duplicated1055.8706.0aint_s0299.g9.t3prominin-1-AJBrowse
77590at6073Complete580.5457.0aint_s0063.g29.t1BSD domain-containing protein 1JBrowse
77591at6073Complete543.7389.0aint_s0113.g4.t1abl interactor 1-likeJBrowse
77596at6073Fragmented306.9283.0aint_s0069.g89.t1PIN2/TERF1-interacting telomerase inhibitor 1JBrowse
77606at6073Duplicated1138.9814.0aint_s0089.g19.t1ataxin-7-like protein 1JBrowse
77606at6073Duplicated1133.8814.0aint_s0089.g19.t2ataxin-7-like protein 1JBrowse
77613at6073Fragmented1197.4810.0aint_s0145.g23.t1centrosomal protein of 95 kDa-likeJBrowse
77614at6073Complete282.4240.0aint_s0203.g20.t1spermatogenesis-associated protein 7JBrowse
77616at6073Complete570.7396.0aint_s0009.g9.t1protein TFG-likeJBrowse
77617at6073Complete1909.21315.0aint_s0071.g26.t1Methylcytosine dioxygenaseJBrowse
77638at6073Complete530.4414.0aint_s0071.g53.t1SUMO-specific isopeptidase USPL1-likeJBrowse
77639at6073Complete973.5725.0aint_s0234.g9.t1MICOS complex subunit MIC60JBrowse
77646at6073Complete1310.51056.0aint_s0225.g3.t1centlein-likeJBrowse
77652at6073Complete597.6425.0aint_s0265.g16.t1ribosome biogenesis protein NOP53-likeJBrowse
77659at6073Complete917.4666.0aint_s0317.g15.t1GRIP and coiled-coil domain-containing protein 1JBrowse
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