BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77830at6073Complete1302.5996.0FUN_039088-T1E3 ubiquitin-protein ligase RBBP6-likeJBrowse
77845at6073Complete244.2243.0FUN_009055-T1syndecan-2JBrowse
77846at6073Complete419.8311.0FUN_040306-T1Ubiquitin-associated protein 1JBrowse
77849at6073Duplicated622.6510.0FUN_043289-T1protein transport protein Sec16A-likeJBrowse
77849at6073Duplicated573.1450.0FUN_043289-T2protein transport protein Sec16A-likeJBrowse
77853at6073Duplicated1266.21103.0FUN_034257-T2uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02-like isoform X1JBrowse
77853at6073Duplicated1258.51103.0FUN_034257-T3uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02-like isoform X1JBrowse
77859at6073Complete312.0235.0FUN_036264-T1craniofacial development protein 1JBrowse
77875at6073Complete977.61577.0FUN_034713-T3uncharacterized protein LOC114963696JBrowse
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