BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7334at6073Duplicated532.0333.0aint_s0181.g3.t1glutaminyl-peptide cyclotransferase-likeJBrowse
7334at6073Duplicated531.6333.0aint_s0181.g3.t2glutaminyl-peptide cyclotransferase-likeJBrowse
7342at6073Complete642.1335.0aint_s0190.g17.t12-aminoethylphosphonate--pyruvate transaminase-likeJBrowse
7350at6073Complete764.5420.0aint_s0151.g33.t1Importin subunit alpha-1JBrowse
7365at6073Fragmented743.7425.0aint_s0330.g12.t2GATOR complex protein MIOSJBrowse
7371at6073Complete1152.1744.0aint_s0251.g18.t1anaphase-promoting complex subunit 4JBrowse
7404at6073Complete561.1327.0aint_s0383.g10.t1cell division cycle protein 123 homologJBrowse
7447at6073Complete386.7216.0aint_s0121.g8.t13-oxo-5-alpha-steroid 4-dehydrogenaseJBrowse
7455at6073Fragmented441.2236.0aint_s0199.g13.t2stress-activated protein kinase JNK-likeJBrowse
7488at6073Complete518.5265.0aint_s0039.g19.t1hydroxyacylglutathione hydrolase, mitochondrial-likeJBrowse
7509at6073Complete1176.5704.0aint_s0139.g18.t1Trafficking protein particle complex subunit 12JBrowse
7511at6073Duplicated959.9535.0aint_s0462.g16.t1Meckel syndrome type 1 protein-likeJBrowse
7511at6073Duplicated953.0535.0aint_s0462.g16.t2Meckel syndrome type 1 protein-likeJBrowse
7534at6073Duplicated187.786.0aint_s0042.g46.t2small nuclear ribonucleoprotein FJBrowse
7534at6073Duplicated185.885.0aint_s0042.g46.t1small nuclear ribonucleoprotein FJBrowse
7542at6073Complete1107.2586.0aint_s0232.g17.t1Nuclear protein localization protein 4JBrowse
7565at6073Complete662.9320.0aint_s0110.g30.t1deoxyribose-phosphate aldolaseJBrowse
7596at6073Complete4208.82147.0aint_s0019.g34.t1activating signal cointegrator 1 complex subunitJBrowse
7610at6073Complete482.4266.0aint_s0478.g3.t1Glutathione S-transferaseJBrowse
7622at6073Complete1089.5787.0aint_s0355.g4.t1Inactive tyrosine-protein kinase transmembrane receptor ror1JBrowse
Go to page: of 170 pages
TOP