BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7225at6073Complete679.7395.0alor_g235.t1uncharacterized protein LOC116299609JBrowse
7235at6073Complete1291.7785.0alor_g21916.t1phospholipase D1-likeJBrowse
7248at6073Complete1771.0982.0alor_g18069.t1WD repeat-containing protein 49JBrowse
7269at6073Complete1279.1744.0alor_g22163.t1chondroitin sulfate synthase 2JBrowse
7275at6073Complete579.2320.0alor_g14128.t1zinc transporter ZIP11-likeJBrowse
7304at6073Complete451.4303.0alor_g24408.t1Aspartate beta-hydroxylase domain-containing 2JBrowse
7306at6073Fragmented722.5345.0alor_g24659.t1EH domain-containing protein 1-likeJBrowse
7334at6073Complete530.5333.0alor_g2879.t1glutaminyl-peptide cyclotransferase-likeJBrowse
7342at6073Fragmented558.5292.0alor_g14002.t12-aminoethylphosphonate--pyruvate transaminase-likeJBrowse
7350at6073Complete913.1509.0alor_g7294.t1Importin subunit alpha-1JBrowse
7365at6073Complete839.0567.0alor_g16262.t1GATOR complex protein MIOSJBrowse
7371at6073Complete1032.4689.0alor_g6543.t1anaphase-promoting complex subunit 4JBrowse
7404at6073Complete560.0327.0alor_g3759.t1cell division cycle protein 123 homologJBrowse
7447at6073Complete391.5221.0alor_g2678.t13-oxo-5-alpha-steroid 4-dehydrogenaseJBrowse
7453at6073Duplicated173.5103.0alor_g8676.t1cytochrome c oxidase assembly protein COX20, mitochondrial-likeJBrowse
7453at6073Duplicated150.4103.0alor_g8676.t2cytochrome c oxidase assembly protein COX20, mitochondrial-likeJBrowse
7455at6073Duplicated902.4435.0alor_g9096.t2stress-activated protein kinase JNK-likeJBrowse
7455at6073Duplicated880.5407.0alor_g9096.t1stress-activated protein kinase JNK-likeJBrowse
7488at6073Complete518.1265.0alor_g6987.t1hydroxyacylglutathione hydrolase, mitochondrial-likeJBrowse
7509at6073Complete1170.5704.0alor_g3039.t1Trafficking protein particle complex subunit 12JBrowse
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