BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4640at6073Duplicated250.7145.0XP_074607449.1MORN repeat-containing protein 2JBrowse
4644at6073Duplicated1433.5845.0XP_074616307.1DNA-binding protein RFX6-likeJBrowse
4644at6073Duplicated1433.5845.0XP_074616308.1DNA-binding protein RFX6-likeJBrowse
4644at6073Duplicated1433.5845.0XP_074616309.1DNA-binding protein RFX6-likeJBrowse
4644at6073Duplicated1433.5845.0XP_074616310.1DNA-binding protein RFX6-likeJBrowse
4644at6073Duplicated1433.5845.0XP_074616311.1DNA-binding protein RFX6-likeJBrowse
4679at6073Complete304.7140.0XP_074622015.1large ribosomal subunit protein uL14JBrowse
4693at6073Complete934.1514.0XP_074629161.1frizzled-5JBrowse
4720at6073Duplicated220.5133.0XP_074636791.1Zinc finger SWIM domain-containing protein 7JBrowse
4720at6073Duplicated220.5133.0XP_074636793.1Zinc finger SWIM domain-containing protein 7JBrowse
4720at6073Duplicated220.5133.0XP_074636794.1Zinc finger SWIM domain-containing protein 7JBrowse
4751at6073Complete2621.31581.0XP_074630187.1laminin subunit gamma-1JBrowse
4789at6073Duplicated494.5355.0XP_074618740.1nucleoporin NUP35-likeJBrowse
4789at6073Duplicated491.6355.0XP_074618741.1nucleoporin NUP35-likeJBrowse
4800at6073Complete420.8245.0XP_074637737.1testis-expressed protein 47JBrowse
4805at6073Complete175.783.0XP_074636197.140S ribosomal protein S21JBrowse
4808at6073Complete564.8348.0XP_074638641.1P2X receptorJBrowse
4816at6073Complete600.4338.0XP_074625154.1tetratricopeptide repeat protein 17JBrowse
4848at6073Complete578.8287.0XP_074609213.1F-actin-capping proteinJBrowse
4849at6073Complete378.0214.0XP_074639065.1synaptogyrin-2-likeJBrowse
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