BUSCO Gene Details in Cyphastrea salae

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Cyphastrea salaeBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 95.3% [S: 69.6%, D: 25.7%] F: 3.0%, M: 1.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,051 (95.3%)2,229 (69.6%)822 (25.7%)97 (3.0%)55 (1.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Cyphastrea salae: 4,072 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
5670at6073Duplicated411.6230.0ENSOFVP00000004830.1MIT domain-containing protein 1JBrowse
5670at6073Duplicated411.6230.0ENSOFVP00000004834.1MIT domain-containing protein 1JBrowse
5708at6073Complete659.5339.0ENSOFVP00000002443.1ATPase family AAA domain-containing 1JBrowse
5718at6073Duplicated1952.7964.0ENSOFVP00000017886.1Valine--tRNA ligaseJBrowse
5718at6073Duplicated1920.1964.0ENSOFVP00000017905.1Valine--tRNA ligaseJBrowse
5762at6073Complete538.1296.0ENSOFVP00000033597.1ribonuclease H2 subunit AJBrowse
5972at6073Duplicated211.5246.0ENSOFVP00000037288.1GRB2-associated-binding protein 1-likeJBrowse
5972at6073Duplicated184.7224.0ENSOFVP00000037282.1GRB2-associated-binding protein 1-likeJBrowse
5992at6073Complete517.7265.0ENSOFVP00000030577.1adenylate kinaseJBrowse
6014at6073Complete717.8372.0ENSOFVP00000021548.1uncharacterized protein LOC116304099JBrowse
6088at6073Complete941.3449.0ENSOFVP00000033521.1casein kinase IJBrowse
6098at6073Fragmented250.0150.0ENSOFVP00000017805.1homeobox protein Nkx-6.1JBrowse
6124at6073Duplicated349.7173.0ENSOFVP00000003407.1secretory immunoglobulin A-binding protein EsiB-likeJBrowse
6124at6073Duplicated328.7173.0ENSOFVP00000003394.1secretory immunoglobulin A-binding protein EsiB-likeJBrowse
6132at6073Complete308.9177.0ENSOFVP00000006782.1tRNA-specific adenosine deaminase 2JBrowse
6185at6073Complete993.3573.0ENSOFVP00000014706.1replication protein A 70 kDa DNA-binding subunitJBrowse
6198at6073Complete1276.8854.0ENSOFVP00000020837.1uncharacterized protein LOC114955792 isoform X1JBrowse
6199at6073Duplicated943.1469.0ENSOFVP00000025679.1citrate synthase, mitochondrial-likeJBrowse
6199at6073Duplicated908.1469.0ENSOFVP00000025666.1citrate synthase, mitochondrial-likeJBrowse
6199at6073Duplicated836.3425.0ENSOFVP00000025655.1citrate synthase, mitochondrial-likeJBrowse
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