BUSCO Gene Details in Hydractinia echinata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydractinia echinataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 92.2% [S: 34.9%, D: 57.2%] F: 4.8%, M: 3.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,952 (92.2%)1,119 (34.9%)1,833 (57.2%)152 (4.8%)99 (3.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydractinia echinata: 6,262 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3527at6073Fragmented728.0510.0ENSDJXP00000001208.1short transient receptor potential channel 4-associated proteinJBrowse
3559at6073Complete896.8429.0ENSDJXP00000004858.1putative ATP-dependent RNA helicase ddx6JBrowse
3561at6073Complete435.6387.0ENSDJXP00000021290.1spermatogenesis-associated protein 48JBrowse
3570at6073Duplicated303.0179.0ENSDJXP00000023463.1ras-related protein Rab-13 isoform X1JBrowse
3570at6073Duplicated303.0179.0ENSDJXP00000023474.1ras-related protein Rab-13 isoform X1JBrowse
3570at6073Duplicated291.2167.0ENSDJXP00000042691.1ras-related protein Rab-13 isoform X1JBrowse
3576at6073Duplicated566.5335.0ENSDJXP00000032946.1Ornithine carbamoyltransferase, mitochondrialJBrowse
3576at6073Duplicated566.0335.0ENSDJXP00000032954.1Ornithine carbamoyltransferase, mitochondrialJBrowse
3582at6073Duplicated960.5438.0ENSDJXP00000029040.1AP-2 complex subunit muJBrowse
3582at6073Duplicated960.2438.0ENSDJXP00000029032.1AP-2 complex subunit muJBrowse
3598at6073Duplicated594.4266.0ENSDJXP00000041361.1E3 ubiquitin-protein ligase SIAH1JBrowse
3598at6073Duplicated593.2262.0ENSDJXP00000041354.1E3 ubiquitin-protein ligase SIAH1JBrowse
3641at6073Fragmented197.2136.0ENSDJXP00000051264.139S ribosomal protein L18, mitochondrial-likeJBrowse
3663at6073Complete1403.6859.0ENSDJXP00000030398.1Peripheral plasma membrane CASKJBrowse
3682at6073Complete369.8289.0ENSDJXP00000038757.1metaxin-1JBrowse
3691at6073Duplicated583.7370.0ENSDJXP00000045017.1Soluble calcium-activated nucleotidase 1JBrowse
3691at6073Duplicated580.4364.0ENSDJXP00000045030.1Soluble calcium-activated nucleotidase 1JBrowse
3707at6073Complete425.6273.0ENSDJXP00000042167.1protein rogdi homologJBrowse
3738at6073Duplicated622.0399.0ENSDJXP00000029342.1E3 ubiquitin-protein ligase pellino homolog 1JBrowse
3738at6073Duplicated622.0399.0ENSDJXP00000029347.1E3 ubiquitin-protein ligase pellino homolog 1JBrowse
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