BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7659at6073Complete1419.0668.0pspe_0.1.m1.68105.m1Crooked neck 1JBrowse
7703at6073Fragmented424.2235.0pspe_0.1.m1.9915.m1solute carrier family 25 member 35JBrowse
7713at6073Complete566.8406.0pspe_0.1.m1.24145.m1ankyrin repeat and BTB/POZ domain-containing protein 1-likeJBrowse
7734at6073Complete1630.0325.0pspe_0.1.m1.53729.m12-acylglycerol O-acyltransferase 2-AJBrowse
7757at6073Complete269.7137.0pspe_0.1.m1.66502.m1Mediator of RNA polymerase II transcription subunit 10JBrowse
7762at6073Complete535.9313.0pspe_0.1.m1.45125.m1LRP2-binding proteinJBrowse
7777at6073Complete667.3461.0pspe_0.1.m1.26787.m1DDB1- and CUL4-associated factor 17JBrowse
7812at6073Complete494.9290.0pspe_0.1.m1.29953.m1UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-likeJBrowse
7833at6073Complete491.8349.0pspe_0.1.m1.33297.m1RNA-binding protein 41-likeJBrowse
7871at6073Complete301.8179.0pspe_0.1.m1.56973.m1ATP synthase subunit s, mitochondrial-likeJBrowse
7880at6073Complete389.3188.0pspe_0.1.m1.40919.m1vesicle-trafficking protein SEC22bJBrowse
7924at6073Complete464.1226.0pspe_0.1.m1.26785.m1Nuclear transcription factor Y subunit AJBrowse
7950at6073Complete655.7301.0pspe_0.1.m1.32842.m1WD repeat-containing protein 61JBrowse
7981at6073Complete752.5400.0pspe_0.1.m1.56706.m1Eukaryotic translation initiation factor 3 subunit EJBrowse
8010at6073Complete1170.4728.0pspe_0.1.m1.49144.m13-hydroxy-3-methylglutaryl-coenzyme A reductaseJBrowse
8027at6073Complete307.1205.0pspe_0.1.m1.52881.m1MKRN2 opposite strand protein-likeJBrowse
8063at6073Duplicated2248.01227.0pspe_0.1.m1.42409.m1vigilin-likeJBrowse
8063at6073Duplicated2063.71158.0pspe_0.1.m1.68427.m1vigilin-likeJBrowse
8095at6073Complete259.0139.0pspe_0.1.m1.15920.m1mediator of RNA polymerase II transcription subunit 22JBrowse
8257at6073Complete1529.5740.0pspe_0.1.m1.51804.m1Cullin-3JBrowse
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