BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77628at6073Duplicated281.2230.0amic_s0024.g77.t2osteopetrosis-associated transmembrane protein 1JBrowse
77638at6073Complete529.5415.0amic_s0127.g47.t1SUMO-specific isopeptidase USPL1-likeJBrowse
77639at6073Complete976.4725.0amic_s0083.g25.t1MICOS complex subunit MIC60JBrowse
77646at6073Complete1294.71058.0amic_s0010.g60.t1centlein-likeJBrowse
77652at6073Fragmented389.7275.0amic_s0059.g16.t1ribosome biogenesis protein NOP53-likeJBrowse
77659at6073Complete1108.1744.0amic_s0046.g6.t1GRIP and coiled-coil domain-containing protein 1JBrowse
77662at6073Complete432.0364.0amic_s0087.g24.t1mRNA-decapping enzyme 1A-likeJBrowse
77664at6073Duplicated358.1200.0amic_s0041.g12.t1microcephalin-likeJBrowse
77664at6073Duplicated358.1200.0amic_s0041.g12.t2microcephalin-likeJBrowse
77665at6073Complete942.8671.0amic_s0050.g111.t1heterogeneous nuclear ribonucleoprotein U-likeJBrowse
77699at6073Complete1336.2967.0amic_s0010.g129.t1rho GTPase-activating protein 100F-likeJBrowse
77723at6073Complete528.3377.0amic_s0018.g58.t1microprocessor complex subunit DGCR8-likeJBrowse
77731at6073Complete1022.0744.0amic_s0001.g33.t1uncharacterized protein LOC116304239JBrowse
77733at6073Complete815.8698.0amic_s0099.g113.t1KAT8 regulatory NSL complex subunit 1-likeJBrowse
77782at6073Fragmented191.5203.0amic_s0036.g12.t1plasminogen activator inhibitor 1 RNA-binding protein-likeJBrowse
77815at6073Duplicated674.6569.0amic_s0271.g6.t1Transcription factor TFIIIB component BJBrowse
77815at6073Duplicated638.1517.0amic_s0271.g6.t2Transcription factor TFIIIB component BJBrowse
77821at6073Complete257.4228.0amic_s0101.g83.t1Zinc finger CCHC domain-containing protein 7JBrowse
77830at6073Fragmented1247.1870.0amic_s0355.g1.t1E3 ubiquitin-protein ligase RBBP6-likeJBrowse
77845at6073Complete246.5243.0amic_s0295.g48.t1syndecan-2JBrowse
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