BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74463at6073Complete483.4283.0ENSORFP00005004152.1inositol monophosphatase 1JBrowse
74464at6073Duplicated2143.11142.0ENSORFP00005020402.1paired amphipathic helix protein Sin3a-likeJBrowse
74464at6073Duplicated2143.11142.0ENSORFP00005020419.1paired amphipathic helix protein Sin3a-likeJBrowse
74466at6073Complete500.0266.0ENSORFP00005003219.1protein MAK16 homologJBrowse
74468at6073Duplicated432.0250.0ENSORFP00005016483.1SPRY domain-containing SOCS box protein 3JBrowse
74468at6073Duplicated432.0250.0ENSORFP00005043703.1SPRY domain-containing SOCS box protein 3JBrowse
74468at6073Duplicated412.3221.0ENSORFP00005011637.1SPRY domain-containing SOCS box protein 3JBrowse
74471at6073Complete2259.21223.0ENSORFP00005017533.1structural maintenance of chromosomes protein 4JBrowse
74478at6073Duplicated653.5377.0ENSORFP00005006837.1chitinase domain-containing protein 1JBrowse
74478at6073Duplicated567.7349.0ENSORFP00005006821.1chitinase domain-containing protein 1JBrowse
74484at6073Complete917.2621.0ENSORFP00005027835.1dihydroxyacetone phosphate acyltransferase-likeJBrowse
74486at6073Duplicated1028.6601.0ENSORFP00005023240.1protein Smaug homolog 1JBrowse
74486at6073Duplicated1020.9597.0ENSORFP00005023256.1protein Smaug homolog 1JBrowse
74487at6073Complete553.7372.0ENSORFP00005008675.1inositol polyphosphate-5-phosphatase AJBrowse
74491at6073Duplicated705.8377.0ENSORFP00005002439.1phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoformJBrowse
74491at6073Duplicated653.2377.0ENSORFP00005002455.1phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoformJBrowse
74499at6073Fragmented449.3231.0ENSORFP00005029760.1zinc metalloproteinase nas-6-likeJBrowse
74505at6073Complete1720.5845.0ENSORFP00005014251.1dynein regulatory complex protein 11JBrowse
74510at6073Complete914.8573.0ENSORFP00005011187.1uncharacterized protein LOC114534012JBrowse
74513at6073Duplicated1618.9879.0ENSORFP00005003440.1protein PTHB1JBrowse
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