BUSCO Gene Details in Paramuricea clavata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Paramuricea clavataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.5% [S: 64.6%, D: 13.9%] F: 17.4%, M: 4.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,513 (78.5%)2,069 (64.6%)444 (13.9%)558 (17.4%)132 (4.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Paramuricea clavata: 3,572 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77294at6073Complete960.9602.0CAB3981124.1Serine/threonine-protein phosphatase 4 regulatory subunit 4JBrowse
77307at6073Complete995.1825.0CAB4014997.1uncharacterized protein LOC116295007JBrowse
77312at6073Complete812.6457.0CAB3996574.1probable ATP-dependent RNA helicase DDX20JBrowse
77313at6073Complete880.0811.0CAB3981694.1axin-1JBrowse
77318at6073Complete341.5274.0CAB3992917.1FACT complex subunit SSRP1-likeJBrowse
77333at6073Complete952.6695.0CAB3993451.1anaphase-promoting complex subunit 5JBrowse
77334at6073Duplicated310.8248.0CAB3996676.1disks large-associated protein 1-likeJBrowse
77334at6073Duplicated310.6248.0CAB3996675.1disks large-associated protein 1-likeJBrowse
77345at6073Complete520.1504.0CAB4014770.1inositol-pentakisphosphate 2-kinaseJBrowse
77346at6073Fragmented509.084.0CAB3983441.1protein phosphatase 1 regulatory subunit 12A-likeJBrowse
77348at6073Fragmented146.7116.0CAB4037129.1sodium/potassium-transporting ATPase subunit beta-1-likeJBrowse
77354at6073Complete189.0149.0CAB3996173.1zinc finger HIT domain-containing protein 3JBrowse
77372at6073Duplicated412.0338.0CAB4019247.1crossover junction endonuclease eme1JBrowse
77372at6073Duplicated411.1338.0CAB4019246.1crossover junction endonuclease eme1JBrowse
77381at6073Complete853.6735.0CAB4008727.1coiled-coil domain-containing protein 186JBrowse
77382at6073Duplicated292.1230.0CAB4022015.1eukaryotic translation initiation factor 3 subunit JJBrowse
77382at6073Duplicated285.1228.0CAB4022016.1eukaryotic translation initiation factor 3 subunit JJBrowse
77383at6073Complete440.5304.0CAB3987014.1probable rRNA-processing protein EBP2JBrowse
77385at6073Fragmented504.0356.0CAB3989662.1TBC1 domain family member 15JBrowse
77386at6073Complete142.0281.0CAB3995213.1G kinase-anchoring protein 1JBrowse
Go to page: of 179 pages
TOP