BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7659at6073Complete1187.8547.0aint_s0061.g33.t1Crooked neck 1JBrowse
7703at6073Duplicated582.2301.0aint_s0188.g17.t1solute carrier family 25 member 35JBrowse
7703at6073Duplicated516.1271.0aint_s2934.g2.t1solute carrier family 25 member 35JBrowse
7713at6073Complete799.3473.0aint_s0346.g14.t1ankyrin repeat and BTB/POZ domain-containing protein 1-likeJBrowse
7734at6073Complete651.5326.0aint_s0070.g12.t12-acylglycerol O-acyltransferase 2-AJBrowse
7757at6073Complete263.9137.0aint_s0471.g6.t1Mediator of RNA polymerase II transcription subunit 10JBrowse
7762at6073Complete562.7319.0aint_s0017.g23.t1LRP2-binding proteinJBrowse
7777at6073Complete695.4474.0aint_s1708.g2.t1DDB1- and CUL4-associated factor 17JBrowse
7833at6073Complete678.9419.0aint_s0174.g43.t1RNA-binding protein 41-likeJBrowse
7841at6073Complete1519.2856.0aint_s0098.g50.t1heat shock 70 kDa protein 12A-likeJBrowse
7871at6073Duplicated302.3181.0aint_s0004.g95.t1ATP synthase subunit s, mitochondrial-likeJBrowse
7871at6073Duplicated302.3181.0aint_s0004.g95.t2ATP synthase subunit s, mitochondrial-likeJBrowse
7880at6073Complete438.4213.0aint_s0123.g44.t1vesicle-trafficking protein SEC22bJBrowse
7902at6073Fragmented581.0339.0aint_s0235.g34.t1Sorting nexin-30JBrowse
7950at6073Complete614.8291.0aint_s0818.g10.t1WD repeat-containing protein 61JBrowse
7981at6073Complete917.5436.0aint_s0055.g4.t1Eukaryotic translation initiation factor 3 subunit EJBrowse
8010at6073Duplicated1248.9730.0aint_s0015.g53.t23-hydroxy-3-methylglutaryl-coenzyme A reductaseJBrowse
8010at6073Duplicated1242.8730.0aint_s0015.g53.t13-hydroxy-3-methylglutaryl-coenzyme A reductaseJBrowse
8027at6073Complete319.7205.0aint_s0035.g48.t1MKRN2 opposite strand protein-likeJBrowse
8063at6073Complete2295.51228.0aint_s0454.g15.t1vigilin-likeJBrowse
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