BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7596at6073Duplicated2092.42108.0amic_s0034.g6.t2activating signal cointegrator 1 complex subunitJBrowse
7610at6073Complete484.0266.0amic_s0115.g32.t1Glutathione S-transferaseJBrowse
7622at6073Duplicated1097.8788.0amic_s0304.g4.t1Inactive tyrosine-protein kinase transmembrane receptor ror1JBrowse
7622at6073Duplicated1097.8788.0amic_s0304.g4.t2Inactive tyrosine-protein kinase transmembrane receptor ror1JBrowse
7659at6073Complete1331.9643.0amic_s0011.g143.t1Crooked neck 1JBrowse
7703at6073Complete581.9302.0amic_s0157.g23.t1solute carrier family 25 member 35JBrowse
7713at6073Complete798.4473.0amic_s0087.g54.t1ankyrin repeat and BTB/POZ domain-containing protein 1-likeJBrowse
7734at6073Complete651.7326.0amic_s0259.g47.t12-acylglycerol O-acyltransferase 2-AJBrowse
7757at6073Complete263.6137.0amic_s0296.g7.t1Mediator of RNA polymerase II transcription subunit 10JBrowse
7762at6073Complete561.7319.0amic_s0032.g40.t1LRP2-binding proteinJBrowse
7777at6073Complete698.8474.0amic_s0113.g80.t1DDB1- and CUL4-associated factor 17JBrowse
7812at6073Complete581.2312.0amic_s0010.g71.t1UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-likeJBrowse
7833at6073Complete680.5419.0amic_s0156.g30.t1RNA-binding protein 41-likeJBrowse
7841at6073Complete1523.1856.0amic_s0083.g48.t1heat shock 70 kDa protein 12A-likeJBrowse
7871at6073Duplicated302.5181.0amic_s0007.g122.t1ATP synthase subunit s, mitochondrial-likeJBrowse
7871at6073Duplicated302.4181.0amic_s0007.g122.t2ATP synthase subunit s, mitochondrial-likeJBrowse
7880at6073Complete438.4213.0amic_s0189.g30.t1vesicle-trafficking protein SEC22bJBrowse
7902at6073Complete776.1414.0amic_s0050.g83.t1Sorting nexin-30JBrowse
7981at6073Complete896.5427.0amic_s0019.g123.t2Eukaryotic translation initiation factor 3 subunit EJBrowse
8010at6073Complete1243.7730.0amic_s0139.g43.t13-hydroxy-3-methylglutaryl-coenzyme A reductaseJBrowse
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