BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4875at6073Complete422.7253.0XP_074631848.1mediator of RNA polymerase II transcription subunit 6JBrowse
4886at6073Complete417.5230.0XP_074610967.1exosome complex component rrp40JBrowse
4889at6073Duplicated404.3185.0XP_074620160.1GTP-binding protein SAR1b-likeJBrowse
4889at6073Duplicated403.8185.0XP_074620159.1GTP-binding protein SAR1b-likeJBrowse
4895at6073Complete205.6117.0XP_074619418.1proteasome maturation protein-likeJBrowse
4908at6073Complete465.2295.0XP_074630494.1lysophosphatidylserine lipase ABHD12-likeJBrowse
4922at6073Complete729.5389.0XP_074613008.1serine/threonine-protein kinase 32B-likeJBrowse
4936at6073Duplicated456.6222.0XP_074611540.1ATP-dependent Clp protease proteolytic subunit-likeJBrowse
4936at6073Duplicated455.7222.0XP_074611541.1ATP-dependent Clp protease proteolytic subunit-likeJBrowse
4936at6073Duplicated418.5192.0XP_074611542.1ATP-dependent Clp protease proteolytic subunit-likeJBrowse
4958at6073Duplicated123.285.0XP_074630635.1cAMP-regulated phosphoprotein 19JBrowse
4958at6073Duplicated111.374.0XP_074630646.1cAMP-regulated phosphoprotein 19JBrowse
4963at6073Complete1187.7556.0XP_074608361.1methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-likeJBrowse
4972at6073Duplicated382.4224.0XP_074636019.1glyoxalase 3-likeJBrowse
4972at6073Duplicated382.4224.0XP_074636021.1glyoxalase 3-likeJBrowse
4972at6073Duplicated382.4224.0XP_074636022.1glyoxalase 3-likeJBrowse
5046at6073Duplicated822.3507.0XP_074621396.1GPI mannosyltransferase 3JBrowse
5046at6073Duplicated726.4481.0XP_074621403.1GPI mannosyltransferase 3JBrowse
5052at6073Complete1474.5804.0XP_074612761.1dipeptidyl peptidase 9JBrowse
5057at6073Complete292.7141.0XP_074639267.140S ribosomal protein S16JBrowse
Go to page: of 238 pages
TOP