BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
8596at6073Complete171.8115.0HOLI00238.G34815eukaryotic translation initiation factor 4E-binding protein 1JBrowse
8599at6073Complete489.0254.0HOLI02956.G14727Cytosolic Fe-S cluster assembly factor NUBP2JBrowse
8605at6073Complete1198.7800.0HOLI01530.G59538Thioredoxin domain-containing 12JBrowse
8658at6073Complete667.5448.0HOLI00432.G33966F-box only protein 47JBrowse
8674at6073Complete452.7277.0HOLI00609.G41907Solute carrier family 25 member 51JBrowse
8715at6073Fragmented165.6111.0HOLI00167.G24159AP-4 complex subunit sigma-1JBrowse
8718at6073Complete1412.3948.0HOLI00469.G13429Ubiquitin conjugation factor E4 BJBrowse
8721at6073Complete799.1461.0HOLI01490.G23449N-acetylgalactosamine kinaseJBrowse
8765at6073Complete598.3316.0HOLI02264.G10692transaldolaseJBrowse
8767at6073Complete1672.2918.0HOLI00073.G39127importin-5JBrowse
8805at6073Duplicated545.3402.0HOLI01222.G30474potassium voltage-gated channel Shal-likeJBrowse
8805at6073Duplicated480.7391.0HOLI00288.G54556potassium voltage-gated channel Shal-likeJBrowse
8845at6073Complete434.9430.0HOLI00116.G41114early growth response protein 1JBrowse
8864at6073Complete299.1211.0HOLI03128.G45508Cyclin-dependent kinase 5 activator 1JBrowse
8874at6073Fragmented279.7214.0HOLI00277.G3704regulation of nuclear pre-mRNA domain-containing protein 1BJBrowse
8899at6073Complete605.7368.0HOLI00165.G22140transcriptional enhancer factor TEF-1-likeJBrowse
8946at6073Complete217.7125.0HOLI00180.G25195NADH dehydrogenase JBrowse
8984at6073Complete766.1432.0HOLI02326.G579256-phosphofructo-2-kinase/fructose-2, 6-bisphosphataseJBrowse
9011at6073Complete1394.2937.0HOLI00162.G41517Coronin-7JBrowse
9020at6073Complete893.2550.0HOLI02785.G16407tRNA (guanine(26)-N(2))-dimethyltransferase-likeJBrowse
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