BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
5121at6073Duplicated360.2184.0ENSORFP00005010638.1GTP-binding protein RhebJBrowse
5121at6073Duplicated359.8184.0ENSORFP00005010649.1GTP-binding protein RhebJBrowse
5127at6073Fragmented311.3211.0ENSORFP00005035112.1E3 ubiquitin-protein ligase CCNB1IP1-likeJBrowse
5132at6073Duplicated494.9327.0ENSORFP00005017248.1pleckstrin-2-likeJBrowse
5132at6073Duplicated453.1327.0ENSORFP00005017235.1pleckstrin-2-likeJBrowse
5141at6073Duplicated1205.1662.0ENSORFP00005018531.1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseJBrowse
5141at6073Duplicated1221.3659.0ENSORFP00005018515.1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseJBrowse
5141at6073Duplicated1204.4656.0ENSORFP00005018543.1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseJBrowse
5181at6073Complete1120.5508.0ENSORFP00005019104.1WD40 repeat-containing SMU1JBrowse
5187at6073Duplicated622.0357.0ENSORFP00005029814.1lymphocyte expansion molecule-likeJBrowse
5187at6073Duplicated683.6354.0ENSORFP00005029826.1lymphocyte expansion molecule-likeJBrowse
5187at6073Duplicated652.9336.0ENSORFP00005029836.1lymphocyte expansion molecule-likeJBrowse
5224at6073Duplicated754.8421.0ENSORFP00005001464.1calcium-independent phospholipase A2-gamma-likeJBrowse
5224at6073Duplicated770.5418.0ENSORFP00005001473.1calcium-independent phospholipase A2-gamma-likeJBrowse
5253at6073Complete1206.0877.0ENSORFP00005012809.1GPI inositol-deacylase-likeJBrowse
5397at6073Duplicated273.4129.0ENSORFP00005006239.140S ribosomal protein S15aJBrowse
5397at6073Duplicated272.7129.0ENSORFP00005006227.140S ribosomal protein S15aJBrowse
5399at6073Duplicated211.5116.0ENSORFP00005047224.1protein lin-52 homologJBrowse
5399at6073Duplicated211.5116.0ENSORFP00005052682.1protein lin-52 homologJBrowse
5474at6073Duplicated311.4189.0ENSORFP00005007031.1U8 snoRNA-decapping enzyme-likeJBrowse
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