BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75050at6073Duplicated821.0413.0ENSORFP00005007938.1O-phosphoseryl-tRNA(Sec) selenium transferase-likeJBrowse
75053at6073Complete502.3308.0ENSORFP00005024933.13-ketodihydrosphingosine reductaseJBrowse
75054at6073Duplicated1272.2862.0ENSORFP00005005274.1bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4JBrowse
75054at6073Duplicated1378.1861.0ENSORFP00005005264.1bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4JBrowse
75076at6073Duplicated643.6412.0ENSORFP00005010009.1Zinc finger protein ubi-d4JBrowse
75076at6073Duplicated603.8395.0ENSORFP00005009996.1Zinc finger protein ubi-d4JBrowse
75078at6073Complete3266.31796.0ENSORFP00005014547.1proteasome activator complex subunit 4JBrowse
75082at6073Complete281.3182.0ENSORFP00005031418.1leucine-rich repeat-containing 51JBrowse
75085at6073Complete388.4237.0ENSORFP00005000103.1rRNA-processing protein UTP23 homologJBrowse
75086at6073Fragmented752.6377.0ENSORFP00005049417.1dihydropyrimidinaseJBrowse
75089at6073Duplicated312.9197.0ENSORFP00005017021.1Clathrin light chain AJBrowse
75089at6073Duplicated270.9197.0ENSORFP00005017014.1Clathrin light chain AJBrowse
75095at6073Duplicated438.4290.0ENSORFP00005023547.1telomere length and silencing protein 1 homologJBrowse
75095at6073Duplicated435.1289.0ENSORFP00005023538.1telomere length and silencing protein 1 homologJBrowse
75098at6073Fragmented1482.0857.0ENSORFP00005048355.1protein still life, isoforms C/SIF type 2JBrowse
75107at6073Complete1273.8777.0ENSORFP00005002159.1N-terminal kinase-like proteinJBrowse
75108at6073Complete756.4381.0ENSORFP00005004813.1Radial spoke head protein 3JBrowse
75109at6073Complete855.9476.0ENSORFP00005040470.1Myotubularin-related protein 9JBrowse
75115at6073Complete585.5378.0ENSORFP00005017076.139S ribosomal protein L3, mitochondrialJBrowse
75116at6073Fragmented1041.7663.0ENSORFP00005001303.1lysine-specific demethylase 2B-likeJBrowse
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