BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75119at6073Duplicated391.4204.0ENSORFP00005000094.1calcium release-activated calcium channel protein 1JBrowse
75119at6073Duplicated391.4204.0ENSORFP00005001359.1calcium release-activated calcium channel protein 1JBrowse
75119at6073Duplicated379.3190.0ENSORFP00005000080.1calcium release-activated calcium channel protein 1JBrowse
75119at6073Duplicated379.3190.0ENSORFP00005001336.1calcium release-activated calcium channel protein 1JBrowse
75126at6073Complete507.5250.0ENSORFP00005018675.1Ribosome maturation protein SBDSJBrowse
75129at6073Duplicated776.0427.0ENSORFP00005005376.1potassium voltage-gated channel subfamily A member 1JBrowse
75129at6073Duplicated689.7401.0ENSORFP00005044575.1potassium voltage-gated channel subfamily A member 1JBrowse
75133at6073Complete949.5546.0ENSORFP00005008059.1transcription factor Dp-1JBrowse
75138at6073Fragmented967.9512.0ENSORFP00005006605.1pleckstrin homology domain-containing family H member 2-likeJBrowse
75141at6073Complete825.0506.0ENSORFP00005040541.1double-strand break repair protein MRE11-likeJBrowse
75154at6073Fragmented419.2352.0ENSORFP00005038790.1Runt-related transcription factor 1JBrowse
75159at6073Complete820.5458.0ENSORFP00005025936.1dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrialJBrowse
75162at6073Fragmented984.1548.0ENSORFP00005029667.197 kDa heat shock protein-likeJBrowse
75163at6073Complete441.6311.0ENSORFP00005053694.1Vacuolar protein sorting-associated protein vta1JBrowse
75165at6073Duplicated989.8654.0ENSORFP00005006968.1islet cell autoantigen 1JBrowse
75165at6073Duplicated977.9643.0ENSORFP00005006961.1islet cell autoantigen 1JBrowse
75169at6073Complete363.4258.0ENSORFP00005015431.1protein Tob1JBrowse
75172at6073Complete776.1527.0ENSORFP00005047461.1Dephospho-CoA kinaseJBrowse
75173at6073Duplicated1686.21067.0ENSORFP00005042228.1protein transport protein Sec24AJBrowse
75173at6073Duplicated1577.21067.0ENSORFP00005042217.1protein transport protein Sec24AJBrowse
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