BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75230at6073Duplicated332.7227.0ENSORFP00005011283.1transmembrane protein 127JBrowse
75230at6073Duplicated309.2201.0ENSORFP00005023957.1transmembrane protein 127JBrowse
75243at6073Complete179.8110.0ENSORFP00005024931.1uncharacterized protein LOC116298739JBrowse
75250at6073Complete305.6203.0ENSORFP00005020528.1UDP-N-acetylglucosamine transferase subunitJBrowse
75253at6073Complete541.3347.0ENSORFP00005008959.1probable protein disulfide-isomerase A6JBrowse
75255at6073Complete916.6481.0ENSORFP00005014192.1calnexin-like isoform X1JBrowse
75260at6073Duplicated872.5541.0ENSORFP00005024888.1probable ATP-dependent RNA helicase DDX59JBrowse
75260at6073Duplicated870.7541.0ENSORFP00005024875.1probable ATP-dependent RNA helicase DDX59JBrowse
75266at6073Fragmented806.3345.0ENSORFP00005036040.1recombining binding protein suppressor of hairless-likeJBrowse
75276at6073Complete547.6354.0ENSORFP00005028682.1nudC domain-containing protein 3JBrowse
75283at6073Duplicated1021.8715.0ENSORFP00005013504.1DNA polymerase, Y-family, little finger domainJBrowse
75283at6073Duplicated1007.3665.0ENSORFP00005002405.1DNA polymerase, Y-family, little finger domainJBrowse
75283at6073Duplicated1007.3665.0ENSORFP00005013500.1DNA polymerase, Y-family, little finger domainJBrowse
75283at6073Duplicated1007.3665.0ENSORFP00005040101.1DNA polymerase, Y-family, little finger domainJBrowse
75284at6073Complete1450.3984.0ENSORFP00005013987.1Kinesin-like protein KIF11JBrowse
75288at6073Complete679.4430.0ENSORFP00005012900.1E3 ubiquitin-protein ligase rnf14JBrowse
75301at6073Duplicated1061.7592.0ENSORFP00005033087.1ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrialJBrowse
75301at6073Duplicated1048.5535.0ENSORFP00005033073.1ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrialJBrowse
75307at6073Duplicated401.9244.0ENSORFP00005008623.1ATP synthase mitochondrial F1 complex assembly factor 2JBrowse
75307at6073Duplicated352.0233.0ENSORFP00005008606.1ATP synthase mitochondrial F1 complex assembly factor 2JBrowse
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