BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75316at6073Fragmented347.5357.0ENSORFP00005053456.1probable ATP-dependent RNA helicase DDX27JBrowse
75322at6073Complete186.4136.0ENSORFP00005009731.128S ribosomal protein S28, mitochondrialJBrowse
75324at6073Duplicated842.6476.0ENSORFP00005007564.1basal body-orientation factor 1JBrowse
75324at6073Duplicated729.2422.0ENSORFP00005007583.1basal body-orientation factor 1JBrowse
75325at6073Duplicated464.2307.0ENSORFP00005008471.128S ribosomal protein S22, mitochondrial-likeJBrowse
75325at6073Duplicated464.2307.0ENSORFP00005037929.128S ribosomal protein S22, mitochondrial-likeJBrowse
75325at6073Duplicated464.1303.0ENSORFP00005037939.128S ribosomal protein S22, mitochondrial-likeJBrowse
75326at6073Duplicated883.1537.0ENSORFP00005003812.1ceramide kinaseJBrowse
75326at6073Duplicated878.9537.0ENSORFP00005003823.1ceramide kinaseJBrowse
75329at6073Duplicated332.8208.0ENSORFP00005044203.1hemK methyltransferase family member 2JBrowse
75329at6073Duplicated321.1208.0ENSORFP00005017555.1hemK methyltransferase family member 2JBrowse
75329at6073Duplicated302.1208.0ENSORFP00005017549.1hemK methyltransferase family member 2JBrowse
75336at6073Complete1686.41055.0ENSORFP00005020265.1nucleolar protein 6JBrowse
75346at6073Complete170.9440.0ENSORFP00005019884.1probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferaseJBrowse
75347at6073Fragmented1961.91223.0ENSORFP00005034704.1brefeldin A-inhibited guanine nucleotide-exchange protein 3JBrowse
75356at6073Duplicated1196.9695.0ENSORFP00005000936.1X-ray repair cross-complementing protein 5JBrowse
75356at6073Duplicated1051.6647.0ENSORFP00005000910.1X-ray repair cross-complementing protein 5JBrowse
75358at6073Duplicated870.0569.0ENSORFP00005012185.1Nitric oxide-associated protein 1JBrowse
75358at6073Duplicated865.7569.0ENSORFP00005012172.1Nitric oxide-associated protein 1JBrowse
75361at6073Duplicated381.5237.0ENSORFP00005025983.1RNA transcription, translation and transport factor proteinJBrowse
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