BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75361at6073Duplicated348.0233.0ENSORFP00005025971.1RNA transcription, translation and transport factor proteinJBrowse
75369at6073Complete527.7321.0ENSORFP00005014665.1mesoderm-specific transcript protein-likeJBrowse
75378at6073Duplicated446.9295.0ENSORFP00005034724.1transmembrane protein 198JBrowse
75378at6073Duplicated409.9276.0ENSORFP00005034717.1transmembrane protein 198JBrowse
75387at6073Complete1206.9750.0ENSORFP00005003132.1SID1 transmembrane family member 1JBrowse
75392at6073Complete860.8491.0ENSORFP00005002892.1RNA-binding protein MEX3BJBrowse
75394at6073Complete720.6434.0ENSORFP00005049533.1cell division control protein 6 homologJBrowse
75398at6073Complete447.9220.0ENSORFP00005026377.1YEATS domain-containing protein 4JBrowse
75402at6073Complete990.4595.0ENSORFP00005009292.1pre-mRNA-processing factor 39JBrowse
75407at6073Duplicated955.1526.0ENSORFP00005016844.1SRSF protein kinase 1JBrowse
75407at6073Duplicated947.3510.0ENSORFP00005016853.1SRSF protein kinase 1JBrowse
75407at6073Duplicated853.6497.0ENSORFP00005016832.1SRSF protein kinase 1JBrowse
75410at6073Complete560.2350.0ENSORFP00005000973.1Zinc finger CCHC domain-containing 4JBrowse
75414at6073Complete369.7210.0ENSORFP00005017893.1charged multivesicular body protein 6JBrowse
75418at6073Complete1192.5748.0ENSORFP00005035457.1inactive rhomboid protein 1JBrowse
75421at6073Complete1122.9696.0ENSORFP00005020621.1ectonucleotide pyrophosphatase/phosphodiesterase family member 3-likeJBrowse
75422at6073Complete471.6312.0ENSORFP00005039107.1transmembrane protein 165JBrowse
75433at6073Duplicated1164.2668.0ENSORFP00005010729.1sn1-specific diacylglycerol lipase alpha-likeJBrowse
75433at6073Duplicated1108.0668.0ENSORFP00005010735.1sn1-specific diacylglycerol lipase alpha-likeJBrowse
75435at6073Complete309.3216.0ENSORFP00005017762.1HAUS augmin-like complex subunit 2JBrowse
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