BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75524at6073Complete262.4181.0ENSORFP00005014887.1nascent polypeptide-associated complex subunit alphaJBrowse
75525at6073Duplicated323.1210.0ENSORFP00005019078.1sugar transporter SWEET1-likeJBrowse
75525at6073Duplicated276.2182.0ENSORFP00005019090.1sugar transporter SWEET1-likeJBrowse
75533at6073Complete409.1276.0ENSORFP00005003399.1alpha-ketoglutarate-dependent dioxygenase alkB homolog 4JBrowse
75536at6073Complete1242.7738.0ENSORFP00005014155.1transcriptional repressor NF-X1-likeJBrowse
75542at6073Duplicated4871.63625.0ENSORFP00005019933.1protocadherin-like proteinJBrowse
75542at6073Duplicated4859.33625.0ENSORFP00005019921.1protocadherin-like proteinJBrowse
75557at6073Complete890.7549.0ENSORFP00005031084.1grainyhead-like protein 1 homologJBrowse
75561at6073Duplicated403.5214.0ENSORFP00005042860.1zinc finger CCHC domain-containing protein 24JBrowse
75561at6073Duplicated365.9190.0ENSORFP00005042850.1zinc finger CCHC domain-containing protein 24JBrowse
75562at6073Fragmented309.4169.0ENSORFP00005028776.1dnaJ homolog subfamily C member 25 homologJBrowse
75566at6073Fragmented868.2382.0ENSORFP00005006842.1osmotic avoidance abnormal protein 3-likeJBrowse
75568at6073Fragmented800.5454.0ENSORFP00005035876.1ubiquitin carboxyl-terminal hydrolase 47JBrowse
75569at6073Fragmented357.6205.0ENSORFP00005045279.1ATP-dependent (S)-NAD(P)H-hydrate dehydrataseJBrowse
75574at6073Complete743.0448.0ENSORFP00005025788.1protein CBFA2T3-likeJBrowse
75587at6073Complete590.1374.0ENSORFP00005027851.1nuclease EXOG, mitochondrialJBrowse
75598at6073Fragmented503.9352.0ENSORFP00005038555.1transcription factor CP2JBrowse
75599at6073Complete992.7628.0ENSORFP00005026126.1rho-related BTB domain-containing protein 1JBrowse
75603at6073Duplicated540.8327.0ENSORFP00005040895.1LIM domain-binding protein 2JBrowse
75603at6073Duplicated548.4325.0ENSORFP00005040886.1LIM domain-binding protein 2JBrowse
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