BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75603at6073Duplicated505.3298.0ENSORFP00005040907.1LIM domain-binding protein 2JBrowse
75603at6073Duplicated523.9296.0ENSORFP00005040880.1LIM domain-binding protein 2JBrowse
75608at6073Fragmented431.7270.0ENSORFP00005037573.1rabenosyn-5JBrowse
75610at6073Complete308.1199.0ENSORFP00005032427.1protein-lysine methyltransferase METTL21D-likeJBrowse
75611at6073Complete1117.3630.0ENSORFP00005030918.1dymeclin-likeJBrowse
75616at6073Duplicated732.4447.0ENSORFP00005045208.1FAS-associated factor 2JBrowse
75616at6073Duplicated732.4447.0ENSORFP00005045213.1FAS-associated factor 2JBrowse
75616at6073Duplicated710.8447.0ENSORFP00005045196.1FAS-associated factor 2JBrowse
75617at6073Complete1087.6659.0ENSORFP00005035598.1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1JBrowse
75618at6073Complete556.2364.0ENSORFP00005014414.1zinc finger protein 622JBrowse
75625at6073Complete352.3213.0ENSORFP00005020754.1Methyltransferase-like protein 23JBrowse
75634at6073Complete533.5331.0ENSORFP00005023852.1Coiled-coil domain-containing protein 130JBrowse
75635at6073Complete546.1368.0ENSORFP00005026844.1transcription factor SOX-4JBrowse
75642at6073Duplicated789.9517.0ENSORFP00005019508.1uncharacterized protein LOC116287646JBrowse
75642at6073Duplicated789.9517.0ENSORFP00005031401.1uncharacterized protein LOC116287646JBrowse
75645at6073Duplicated813.2509.0ENSORFP00005018363.1Histone H4 transcription factorJBrowse
75645at6073Duplicated813.1509.0ENSORFP00005018369.1Histone H4 transcription factorJBrowse
75651at6073Complete1677.41058.0ENSORFP00005002538.1Hypoxia up-regulated protein 1JBrowse
75660at6073Complete758.2471.0ENSORFP00005044963.1importin subunit alpha-9-likeJBrowse
75664at6073Complete630.2399.0ENSORFP00005003067.1SynaptotagminJBrowse
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