BUSCO Gene Details in Acropora cytherea

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora cythereaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.7% [S: 67.8%, D: 12.9%] F: 10.9%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,586 (80.7%)2,172 (67.8%)414 (12.9%)349 (10.9%)268 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora cytherea: 3,438 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7871at6073Fragmented179.5120.0acyt_s0120.g19.t1ATP synthase subunit s, mitochondrial-likeJBrowse
7880at6073Fragmented317.4156.0acyt_s0041.g136.t1vesicle-trafficking protein SEC22bJBrowse
7902at6073Complete776.2414.0acyt_s0001.g217.t1Sorting nexin-30JBrowse
7950at6073Fragmented461.8218.0acyt_s0037.g91.t1WD repeat-containing protein 61JBrowse
7981at6073Duplicated962.6436.0acyt_s0047.g20.t2Eukaryotic translation initiation factor 3 subunit EJBrowse
7981at6073Duplicated962.6436.0acyt_s0047.g20.t3Eukaryotic translation initiation factor 3 subunit EJBrowse
7981at6073Duplicated911.2436.0acyt_s0047.g20.t1Eukaryotic translation initiation factor 3 subunit EJBrowse
8010at6073Complete1243.6730.0acyt_s0017.g17.t13-hydroxy-3-methylglutaryl-coenzyme A reductaseJBrowse
8027at6073Complete328.6205.0acyt_s0002.g137.t1MKRN2 opposite strand protein-likeJBrowse
8063at6073Complete2297.21228.0acyt_s0032.g107.t1vigilin-likeJBrowse
8095at6073Complete260.2139.0acyt_s0177.g16.t1mediator of RNA polymerase II transcription subunit 22JBrowse
8171at6073Duplicated227.5119.0acyt_s0022.g150.t1mitochondrial pyruvate carrier 2JBrowse
8171at6073Duplicated213.9108.0acyt_s0022.g150.t2mitochondrial pyruvate carrier 2JBrowse
8257at6073Complete1599.8740.0acyt_s0022.g82.t1Cullin-3JBrowse
8280at6073Complete329.0217.0acyt_s0212.g17.t1uncharacterized protein LOC122947107JBrowse
8347at6073Complete1536.3905.0acyt_s0005.g149.t1inositol polyphosphate 5-phosphatase OCRLJBrowse
8368at6073Duplicated1276.1688.0acyt_s0011.g142.t1FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8368at6073Duplicated1266.7688.0acyt_s0011.g142.t2FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8406at6073Duplicated608.8323.0acyt_s0132.g12.t1palmitoyltransferase ZDHHC15B-likeJBrowse
8406at6073Duplicated603.3323.0acyt_s0132.g12.t2palmitoyltransferase ZDHHC15B-likeJBrowse
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