BUSCO Gene Details in Acropora echinata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora echinataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.0% [S: 66.3%, D: 12.6%] F: 12.4%, M: 8.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,530 (79.0%)2,125 (66.3%)405 (12.6%)397 (12.4%)276 (8.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora echinata: 3,435 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7950at6073Complete632.4301.0aech_s0169.g29.t1WD repeat-containing protein 61JBrowse
7981at6073Duplicated964.9436.0aech_s0011.g226.t3Eukaryotic translation initiation factor 3 subunit EJBrowse
7981at6073Duplicated914.3436.0aech_s0011.g226.t1Eukaryotic translation initiation factor 3 subunit EJBrowse
8010at6073Complete1245.2730.0aech_s0078.g16.t13-hydroxy-3-methylglutaryl-coenzyme A reductaseJBrowse
8027at6073Complete329.2205.0aech_s0108.g45.t1MKRN2 opposite strand protein-likeJBrowse
8063at6073Complete2294.61228.0aech_s0022.g79.t1vigilin-likeJBrowse
8095at6073Complete262.4139.0aech_s0038.g46.t1mediator of RNA polymerase II transcription subunit 22JBrowse
8171at6073Duplicated227.5119.0aech_s0003.g540.t1mitochondrial pyruvate carrier 2JBrowse
8171at6073Duplicated214.4108.0aech_s0003.g540.t2mitochondrial pyruvate carrier 2JBrowse
8257at6073Complete1446.5685.0aech_s0002.g196.t1Cullin-3JBrowse
8280at6073Complete329.0217.0aech_s0073.g58.t1uncharacterized protein LOC122947107JBrowse
8347at6073Complete1243.1751.0aech_s0003.g371.t1inositol polyphosphate 5-phosphatase OCRLJBrowse
8368at6073Duplicated1177.6653.0aech_s0067.g21.t1FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8368at6073Duplicated1167.7653.0aech_s0067.g21.t2FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8406at6073Complete608.4324.0aech_s0028.g70.t2palmitoyltransferase ZDHHC15B-likeJBrowse
8407at6073Complete574.0282.0aech_s0046.g66.t1Mitogen-activated kinase 1JBrowse
8465at6073Duplicated705.7343.0aech_s0004.g153.t1hepatocyte nuclear factor 4-gammaJBrowse
8465at6073Duplicated704.2341.0aech_s0004.g153.t2hepatocyte nuclear factor 4-gammaJBrowse
8477at6073Complete194.5135.0aech_s0206.g18.t1uncharacterized protein LOC116295621JBrowse
8488at6073Complete572.4343.0aech_s0008.g133.t1spermatogenesis-associated protein 17JBrowse
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