BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7950at6073Complete650.8301.0alor_g11039.t1WD repeat-containing protein 61JBrowse
7981at6073Complete918.0436.0alor_g24562.t1Eukaryotic translation initiation factor 3 subunit EJBrowse
8010at6073Complete1202.8685.0alor_g6200.t13-hydroxy-3-methylglutaryl-coenzyme A reductaseJBrowse
8027at6073Complete328.1205.0alor_g6282.t1MKRN2 opposite strand protein-likeJBrowse
8063at6073Complete2289.41228.0alor_g25036.t1vigilin-likeJBrowse
8095at6073Duplicated259.1139.0alor_g19146.t1mediator of RNA polymerase II transcription subunit 22JBrowse
8095at6073Duplicated259.1139.0alor_g20675.t1mediator of RNA polymerase II transcription subunit 22JBrowse
8171at6073Complete229.2119.0alor_g23474.t1mitochondrial pyruvate carrier 2JBrowse
8257at6073Complete1528.1740.0alor_g7148.t1Cullin-3JBrowse
8347at6073Complete1511.9905.0alor_g23997.t1inositol polyphosphate 5-phosphatase OCRLJBrowse
8368at6073Complete1123.5615.0alor_g21719.t1FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8406at6073Fragmented501.7265.0alor_g25343.t1palmitoyltransferase ZDHHC15B-likeJBrowse
8407at6073Complete782.9347.0alor_g10716.t1Mitogen-activated kinase 1JBrowse
8414at6073Complete247.8158.0alor_g21016.t1class E basic helix-loop-helix protein 22 isoform X1JBrowse
8465at6073Fragmented545.0295.0alor_g19519.t1hepatocyte nuclear factor 4-gammaJBrowse
8477at6073Complete191.5135.0alor_g17651.t1uncharacterized protein LOC116295621JBrowse
8488at6073Complete569.8343.0alor_g11279.t1spermatogenesis-associated protein 17JBrowse
8515at6073Complete447.0247.0alor_g25681.t1ras-related protein Rab-36JBrowse
8529at6073Complete741.7456.0alor_g9072.t1ras association domain-containing protein 1JBrowse
8596at6073Duplicated205.3123.0alor_g21871.t1eukaryotic translation initiation factor 4E-binding protein 1JBrowse
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