BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
8027at6073Complete326.5205.0amic_s0045.g50.t1MKRN2 opposite strand protein-likeJBrowse
8063at6073Complete2291.91228.0amic_s0062.g40.t1vigilin-likeJBrowse
8095at6073Complete262.4139.0amic_s0064.g59.t1mediator of RNA polymerase II transcription subunit 22JBrowse
8171at6073Complete229.4119.0amic_s0025.g58.t1mitochondrial pyruvate carrier 2JBrowse
8257at6073Complete1600.2740.0amic_s0023.g137.t1Cullin-3JBrowse
8280at6073Complete328.3217.0amic_s0170.g4.t1uncharacterized protein LOC122947107JBrowse
8347at6073Complete1535.9905.0amic_s0024.g22.t1inositol polyphosphate 5-phosphatase OCRLJBrowse
8368at6073Duplicated1484.4688.0amic_s0182.g57.t2FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8368at6073Duplicated1484.3688.0amic_s0182.g57.t3FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8368at6073Duplicated1474.3688.0amic_s0182.g57.t4FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8368at6073Duplicated1275.6688.0amic_s0182.g57.t1FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8406at6073Fragmented326.5182.0amic_s0098.g70.t1palmitoyltransferase ZDHHC15B-likeJBrowse
8407at6073Complete782.5347.0amic_s0085.g18.t1Mitogen-activated kinase 1JBrowse
8414at6073Complete247.8158.0amic_s0306.g3.t1class E basic helix-loop-helix protein 22 isoform X1JBrowse
8465at6073Duplicated705.7343.0amic_s0002.g203.t1hepatocyte nuclear factor 4-gammaJBrowse
8465at6073Duplicated704.2341.0amic_s0002.g203.t2hepatocyte nuclear factor 4-gammaJBrowse
8477at6073Complete197.8135.0amic_s0003.g107.t1uncharacterized protein LOC116295621JBrowse
8488at6073Duplicated642.0343.0amic_s0011.g175.t3spermatogenesis-associated protein 17JBrowse
8488at6073Duplicated573.6343.0amic_s0011.g175.t2spermatogenesis-associated protein 17JBrowse
8488at6073Duplicated573.0343.0amic_s0011.g175.t1spermatogenesis-associated protein 17JBrowse
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