BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
5063at6073Complete621.9309.0XP_074615309.1mitoferrin-1JBrowse
5121at6073Complete366.1184.0XP_074623686.1GTP-binding protein RhebJBrowse
5127at6073Complete481.0269.0XP_074639268.1E3 ubiquitin-protein ligase CCNB1IP1-likeJBrowse
5132at6073Duplicated568.0352.0XP_074620509.1pleckstrin-2-likeJBrowse
5132at6073Duplicated537.7352.0XP_074620511.1pleckstrin-2-likeJBrowse
5141at6073Duplicated1229.6657.0XP_074637464.1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseJBrowse
5141at6073Duplicated1229.3657.0XP_074637465.1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseJBrowse
5181at6073Duplicated1134.8508.0XP_074613677.1WD40 repeat-containing SMU1JBrowse
5181at6073Duplicated1059.0476.0XP_074613678.1WD40 repeat-containing SMU1JBrowse
5187at6073Complete795.1395.0XP_074610924.1lymphocyte expansion molecule-likeJBrowse
5223at6073Complete686.6431.0XP_074636673.1inactive peptidyl-prolyl cis-trans isomerase FKBP6-likeJBrowse
5224at6073Complete777.6447.0XP_074610016.1calcium-independent phospholipase A2-gamma-likeJBrowse
5253at6073Complete1274.4882.0XP_074624057.1GPI inositol-deacylase-likeJBrowse
5397at6073Duplicated273.3129.0XP_074606033.140S ribosomal protein S15aJBrowse
5397at6073Duplicated272.6129.0XP_074606032.140S ribosomal protein S15aJBrowse
5399at6073Complete213.3116.0XP_074629359.1protein lin-52 homologJBrowse
5460at6073Complete442.1220.0XP_074638074.1glutamine amidotransferase-like class 1 domain-containing 1JBrowse
5474at6073Complete334.3190.0XP_074619266.1U8 snoRNA-decapping enzyme-likeJBrowse
5475at6073Complete320.9185.0XP_074622534.1ATP synthase subunit C lysine N-methyltransferase-likeJBrowse
5506at6073Fragmented197.5135.0XP_074606075.128S ribosomal protein S24, mitochondrialJBrowse
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