BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
8749at6073Fragmented1303.3165.0pspe_0.1.m1.25480.m1epithelial discoidin domain-containing receptor 1JBrowse
8767at6073Complete1949.7938.0pspe_0.1.m1.5766.m1importin-5JBrowse
8805at6073Complete613.5358.0pspe_0.1.m1.45594.m1potassium voltage-gated channel Shal-likeJBrowse
8864at6073Complete396.1261.0pspe_0.1.m1.7030.m1Cyclin-dependent kinase 5 activator 1JBrowse
8869at6073Complete473.4254.0pspe_0.1.m1.21185.m1Haloacid dehalogenase-like hydrolase domain-containing protein 2JBrowse
8874at6073Complete560.8303.0pspe_0.1.m1.57390.m1regulation of nuclear pre-mRNA domain-containing protein 1BJBrowse
8899at6073Complete757.6398.0pspe_0.1.m1.25102.m1transcriptional enhancer factor TEF-1-likeJBrowse
8905at6073Complete586.6419.0pspe_0.1.m1.33505.m1protein naked cuticle homolog 2-likeJBrowse
8984at6073Complete877.1433.0pspe_0.1.m1.43934.m16-phosphofructo-2-kinase/fructose-2, 6-bisphosphataseJBrowse
9011at6073Complete1502.1891.0pspe_0.1.m1.51421.m1Coronin-7JBrowse
9020at6073Complete1030.0551.0pspe_0.1.m1.18473.m1tRNA (guanine(26)-N(2))-dimethyltransferase-likeJBrowse
9061at6073Complete429.0272.0pspe_0.1.m1.25905.m1L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-likeJBrowse
9075at6073Fragmented507.1284.0pspe_0.1.m1.42604.m1Ankyrin repeat and MYND domain-containing protein 2JBrowse
9095at6073Complete422.8221.0pspe_0.1.m1.21532.m1Ubiquitin-conjugating enzyme E2 J2JBrowse
9109at6073Fragmented262.3137.0pspe_0.1.m1.15198.m1COMM domain-containing protein 1JBrowse
9117at6073Complete610.4341.0pspe_0.1.m1.34877.m1Protein Wnt-1JBrowse
9128at6073Complete631.3387.0pspe_0.1.m1.50482.m1monoacylglycerol lipase ABHD2-likeJBrowse
9155at6073Complete624.9342.0pspe_0.1.m1.46315.m1GDP-fucose protein O-fucosyltransferase 1JBrowse
9217at6073Complete248.9136.0pspe_0.1.m1.27681.m12Fe-2S ferredoxin-likeJBrowse
9224at6073Complete656.6333.0pspe_0.1.m1.51919.m1GDP-fucose transporter 1JBrowse
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