BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
5474at6073Duplicated311.4189.0ENSORFP00005012485.1U8 snoRNA-decapping enzyme-likeJBrowse
5474at6073Duplicated306.1186.0ENSORFP00005038679.1U8 snoRNA-decapping enzyme-likeJBrowse
5506at6073Complete227.9153.0ENSORFP00005024279.128S ribosomal protein S24, mitochondrialJBrowse
5527at6073Complete276.1155.0ENSORFP00005002163.1protein SYS1 homologJBrowse
5560at6073Fragmented228.7188.0ENSORFP00005022335.1snRNA-activating protein complex subunit 3JBrowse
5616at6073Complete360.4184.0ENSORFP00005013267.1mitochondrial import inner membrane translocase subunit Tim23JBrowse
5708at6073Duplicated644.0343.0ENSORFP00005018332.1ATPase family AAA domain-containing 1JBrowse
5708at6073Duplicated559.7300.0ENSORFP00005018320.1ATPase family AAA domain-containing 1JBrowse
5718at6073Duplicated1981.6964.0ENSORFP00005010657.1Valine--tRNA ligaseJBrowse
5718at6073Duplicated1952.6964.0ENSORFP00005010641.1Valine--tRNA ligaseJBrowse
5718at6073Duplicated1878.7893.0ENSORFP00005044004.1Valine--tRNA ligaseJBrowse
5762at6073Complete547.6296.0ENSORFP00005024558.1ribonuclease H2 subunit AJBrowse
5972at6073Complete205.5227.0ENSORFP00005026719.1GRB2-associated-binding protein 1-likeJBrowse
5992at6073Complete503.9265.0ENSORFP00005028469.1adenylate kinaseJBrowse
6014at6073Complete701.2373.0ENSORFP00005009364.1uncharacterized protein LOC116304099JBrowse
6088at6073Complete910.2450.0ENSORFP00005019482.1casein kinase IJBrowse
6098at6073Complete279.8199.0ENSORFP00005022878.1homeobox protein Nkx-6.1JBrowse
6124at6073Complete339.5171.0ENSORFP00005006084.1secretory immunoglobulin A-binding protein EsiB-likeJBrowse
6132at6073Duplicated283.8175.0ENSORFP00005025706.1tRNA-specific adenosine deaminase 2JBrowse
6132at6073Duplicated283.8175.0ENSORFP00005032321.1tRNA-specific adenosine deaminase 2JBrowse
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