BUSCO Gene Details in Turritopsis rubra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Turritopsis rubraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,487 (77.6%)2,400 (74.9%)87 (2.7%)376 (11.7%)340 (10.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Turritopsis rubra: 2,952 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
9452at6073Complete459.7281BRAKERIOWP00000004654.1Cyclin-dependent kinase 6JBrowse
9467at6073Complete440.9472BRAKERIOWP00000010129.1stabilizer of axonemal microtubules 1JBrowse
9477at6073Complete255.5256BRAKERIOWP00000012388.1aristaless-related homeobox protein-likeJBrowse
9539at6073Fragmented263.4160BRAKERIOWP00000007029.1copper homeostasis protein cutC homologJBrowse
9560at6073Complete210.9141BRAKERIOWP00000002511.1protein cornichon homolog 4JBrowse
9593at6073Complete759.4364BRAKERIOWP00000004229.1developmentally-regulated GTP-binding protein 2JBrowse
9621at6073Complete581.9308BRAKERIOWP00000004315.1DNA-directed RNA polymerase III subunit RPC6-likeJBrowse
9633at6073Complete834.9760BRAKERIOWP00000000195.1WD repeat-containing protein 75JBrowse
9660at6073Complete1281.1714BRAKERIOWP00000016231.1Ribosomal protein S6 kinase alpha-5JBrowse
9703at6073Complete784.9548BRAKERIOWP00000007324.1serine/threonine-protein kinase Nek11JBrowse
9733at6073Fragmented114.9145BRAKERIOWP00000009747.1cyclin-dependent kinase inhibitor 1-likeJBrowse
9775at6073Complete752.3813BRAKERIOWP00000003923.1MAP/microtubule affinity-regulating kinase 3-likeJBrowse
9777at6073Complete630.3340BRAKERIOWP00000014661.1Protein farnesyltransferase subunit betaJBrowse
9835at6073Complete178.5163BRAKERIOWP00000013009.1synaptonemal complex protein 2-likeJBrowse
9852at6073Complete518.6323BRAKERIOWP00000004968.1solute carrier family 35 member E2A-likeJBrowse
9934at6073Complete685.2458BRAKERIOWP00000007059.1Alpha-(1,3)-fucosyltransferase 10JBrowse
9941at6073Complete119.9153BRAKERIOWP00000016130.1uncharacterized protein LOC130613352 isoform X1JBrowse
9964at6073Complete1906.41597BRAKERIOWP00000017578.1GREB1-like proteinJBrowse
10077at6073Fragmented539.7288BRAKERIOWP00000010935.1serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit BJBrowse
10157at6073Fragmented296.5189BRAKERIOWP00000003566.1uncharacterized protein LOC124809034JBrowse
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