BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75815at6073Complete323.2201.0ENSORFP00005007701.126S proteasome non-ATPase regulatory subunit 9JBrowse
75820at6073Duplicated530.9335.0ENSORFP00005018969.1heterogeneous nuclear ribonucleoprotein H3-likeJBrowse
75820at6073Duplicated530.9335.0ENSORFP00005018975.1heterogeneous nuclear ribonucleoprotein H3-likeJBrowse
75826at6073Fragmented224.4120.0ENSORFP00005045624.1inactive hydroxysteroid dehydrogenase-like protein 1JBrowse
75831at6073Fragmented469.2327.0ENSORFP00005048134.1tumor susceptibility gene 101 protein-likeJBrowse
75842at6073Complete212.7129.0ENSORFP00005029899.1mediator of RNA polymerase II transcription subunit 21JBrowse
75846at6073Complete496.6289.0ENSORFP00005033107.1transmembrane protein 19JBrowse
75851at6073Duplicated1075.7685.0ENSORFP00005009659.1WD repeat-containing protein 91JBrowse
75851at6073Duplicated1025.2685.0ENSORFP00005009639.1WD repeat-containing protein 91JBrowse
75852at6073Duplicated849.5542.0ENSORFP00005012950.1anaphase-promoting complex subunit 7JBrowse
75852at6073Duplicated926.1541.0ENSORFP00005012976.1anaphase-promoting complex subunit 7JBrowse
75861at6073Complete382.7256.0ENSORFP00005038865.1pituitary homeobox 2-likeJBrowse
75862at6073Complete716.7481.0ENSORFP00005011356.1F-box/LRR-repeat protein 5JBrowse
75871at6073Complete1286.6821.0ENSORFP00005005614.1pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3-likeJBrowse
75882at6073Complete797.2437.0ENSORFP00005000804.1membralin-like isoform X1JBrowse
75888at6073Complete374.6293.0ENSORFP00005001502.1stAR-related lipid transfer protein 7, mitochondrialJBrowse
75900at6073Duplicated570.0351.0ENSORFP00005039148.1AAR2 homologJBrowse
75900at6073Duplicated569.8351.0ENSORFP00005039166.1AAR2 homologJBrowse
75908at6073Fragmented417.1280.0ENSORFP00005043285.1uncharacterized protein LOC116298666JBrowse
75912at6073Duplicated625.6335.0ENSORFP00005023465.1E3 ubiquitin-protein ligase RING2-likeJBrowse
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