BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75968at6073Complete1117.8755.0ENSORFP00005006770.1helicase POLQ-likeJBrowse
75973at6073Complete740.0426.0ENSORFP00005028182.1tRNA-dihydrouridine(20) synthase JBrowse
75974at6073Duplicated1141.7675.0ENSORFP00005026029.1pseudouridine-metabolizing bifunctional protein C1861.05-likeJBrowse
75974at6073Duplicated1092.4675.0ENSORFP00005026012.1pseudouridine-metabolizing bifunctional protein C1861.05-likeJBrowse
75975at6073Duplicated777.7459.0ENSORFP00005007476.1transmembrane protein 161B-likeJBrowse
75975at6073Duplicated756.7453.0ENSORFP00005007470.1transmembrane protein 161B-likeJBrowse
75977at6073Duplicated649.8428.0ENSORFP00005012504.1Epsin-2JBrowse
75977at6073Duplicated649.8428.0ENSORFP00005038217.1Epsin-2JBrowse
75977at6073Duplicated648.5428.0ENSORFP00005028214.1Epsin-2JBrowse
75985at6073Fragmented135.488.0ENSORFP00005037804.1EKC/KEOPS complex subunit Tprkb-likeJBrowse
75987at6073Complete634.4418.0ENSORFP00005002208.1spartin-likeJBrowse
76002at6073Fragmented592.5443.0ENSORFP00005032848.1E3 ubiquitin-protein ligase TRIM33-likeJBrowse
76005at6073Complete1281.4873.0ENSORFP00005031032.1Ribitol-5-phosphate transferase FKTN, N-terminalJBrowse
76009at6073Complete1075.7699.0ENSORFP00005029273.1E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76012at6073Duplicated1006.2629.0ENSORFP00005019455.1arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-likeJBrowse
76012at6073Duplicated867.4546.0ENSORFP00005019441.1arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-likeJBrowse
76014at6073Duplicated1225.1780.0ENSORFP00005015241.1Progesterone-induced-blocking factor 1JBrowse
76014at6073Duplicated1108.2695.0ENSORFP00005015227.1Progesterone-induced-blocking factor 1JBrowse
76027at6073Complete406.5243.0ENSORFP00005009160.1acidic leucine-rich nuclear phosphoprotein 32 family member B-likeJBrowse
76028at6073Complete358.2220.0ENSORFP00005029123.1bcl-2 homologous antagonist killerJBrowse
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