BUSCO Gene Details in Cyphastrea salae

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Cyphastrea salaeBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 95.3% [S: 69.6%, D: 25.7%] F: 3.0%, M: 1.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,051 (95.3%)2,229 (69.6%)822 (25.7%)97 (3.0%)55 (1.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Cyphastrea salae: 4,072 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76928at6073Complete299.3202.0ENSOFVP00000017836.1E3 ubiquitin-protein ligase march2JBrowse
76929at6073Complete230.6167.0ENSOFVP00000037046.1non-histone chromosomal protein 6JBrowse
76930at6073Complete996.7722.0ENSOFVP00000002378.1DNA replication factor Cdt1JBrowse
76935at6073Complete248.4171.0ENSOFVP00000017132.1uncharacterized protein LOC110236280 isoform X1JBrowse
76938at6073Complete769.5458.0ENSOFVP00000033231.1ELMO domain-containing protein 3JBrowse
76943at6073Complete279.6161.0ENSOFVP00000030323.1Zinc finger MYND domain-containing protein 11JBrowse
76945at6073Duplicated393.7242.0ENSOFVP00000021270.1Kv channel-interacting 1JBrowse
76945at6073Duplicated384.1218.0ENSOFVP00000021264.1Kv channel-interacting 1JBrowse
76948at6073Complete538.2360.0ENSOFVP00000011522.1coiled-coil domain-containing protein 92JBrowse
76966at6073Duplicated401.7287.0ENSOFVP00000028634.1E2F-associated phosphoprotein-likeJBrowse
76966at6073Duplicated354.6240.0ENSOFVP00000028620.1E2F-associated phosphoprotein-likeJBrowse
76966at6073Duplicated354.6240.0ENSOFVP00000028626.1E2F-associated phosphoprotein-likeJBrowse
76990at6073Duplicated889.8589.0ENSOFVP00000030759.1U3 small nucleolar RNA-associated protein 14 AJBrowse
76990at6073Duplicated792.1555.0ENSOFVP00000030741.1U3 small nucleolar RNA-associated protein 14 AJBrowse
76992at6073Duplicated673.1418.0ENSOFVP00000034993.1glycerate kinase-likeJBrowse
76992at6073Duplicated631.3408.0ENSOFVP00000035000.1glycerate kinase-likeJBrowse
76993at6073Complete720.4506.0ENSOFVP00000008341.1afadin- and alpha-actinin-binding protein B-likeJBrowse
77002at6073Complete888.8522.0ENSOFVP00000020770.1Deformed epidermal autoregulatory factor 1JBrowse
77005at6073Complete507.2324.0ENSOFVP00000031697.1thioredoxin domain-containing protein 5JBrowse
77006at6073Complete432.9242.0ENSOFVP00000029104.1UbiA prenyltransferase domain-containing protein 1JBrowse
Go to page: of 204 pages
TOP