BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76087at6073Fragmented224.6102.0ENSORFP00005027804.1transformer-2 protein homolog beta-likeJBrowse
76096at6073Duplicated438.5296.0ENSORFP00005017596.1zinc transporter ZIP1JBrowse
76096at6073Duplicated429.0287.0ENSORFP00005033115.1zinc transporter ZIP1JBrowse
76101at6073Duplicated283.3200.0ENSORFP00005016397.1Zinc finger Ran-binding domain-containing protein 2JBrowse
76101at6073Duplicated282.9200.0ENSORFP00005016410.1Zinc finger Ran-binding domain-containing protein 2JBrowse
76104at6073Duplicated440.0278.0ENSORFP00005015473.1dnaJ homolog subfamily C member 17JBrowse
76104at6073Duplicated402.0278.0ENSORFP00005015459.1dnaJ homolog subfamily C member 17JBrowse
76107at6073Complete416.6258.0ENSORFP00005013956.1coiled-coil domain-containing protein 189JBrowse
76113at6073Fragmented1537.7829.0ENSORFP00005029718.1protein timeless homologJBrowse
76125at6073Fragmented338.4262.0ENSORFP00005031031.1dynein assembly factor 4, axonemalJBrowse
76132at6073Complete572.4341.0ENSORFP00005040405.1transcription factor Sp5-likeJBrowse
76135at6073Duplicated764.8489.0ENSORFP00005008333.1Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1JBrowse
76135at6073Duplicated757.3489.0ENSORFP00005008331.1Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1JBrowse
76143at6073Duplicated562.6345.0ENSORFP00005020667.1ubiquitin carboxyl-terminal hydrolase MINDY-1JBrowse
76143at6073Duplicated562.4337.0ENSORFP00005020679.1ubiquitin carboxyl-terminal hydrolase MINDY-1JBrowse
76155at6073Complete556.5336.0ENSORFP00005034170.1O(6)-methylguanine-induced apoptosis 2JBrowse
76158at6073Fragmented239.3122.0ENSORFP00005028975.1putative RNA-binding protein Luc7-like 2JBrowse
76172at6073Complete852.9532.0ENSORFP00005023014.1peptidyl-prolyl cis-trans isomerase-like 4JBrowse
76175at6073Duplicated686.0407.0ENSORFP00005028430.1homeobox protein Meis1-likeJBrowse
76175at6073Duplicated685.9407.0ENSORFP00005028440.1homeobox protein Meis1-likeJBrowse
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