BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
540at6073Complete745.1339.0XP_074638547.1WD repeat domain phosphoinositide-interacting protein 3JBrowse
548at6073Duplicated481.8279.0XP_074627715.1ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase-likeJBrowse
548at6073Duplicated481.1279.0XP_074627697.1ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase-likeJBrowse
548at6073Duplicated481.1279.0XP_074627707.1ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase-likeJBrowse
548at6073Duplicated480.8279.0XP_074627688.1ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase-likeJBrowse
598at6073Complete379.6211.0XP_074638291.1N-alpha-acetyltransferase 60JBrowse
599at6073Duplicated206.8111.0XP_074616840.1guanine nucleotide exchange factor MSS4JBrowse
599at6073Duplicated179.9111.0XP_074616841.1guanine nucleotide exchange factor MSS4JBrowse
614at6073Complete705.1417.0XP_074625541.1F-box only protein 42JBrowse
625at6073Duplicated326.4187.0XP_074635000.1regulator of G-protein signaling 19JBrowse
625at6073Duplicated324.9185.0XP_074635002.1regulator of G-protein signaling 19JBrowse
625at6073Duplicated326.2183.0XP_074635001.1regulator of G-protein signaling 19JBrowse
625at6073Duplicated320.4179.0XP_074635003.1regulator of G-protein signaling 19JBrowse
635at6073Complete466.6264.0XP_074621388.1START domain-containing protein 10JBrowse
639at6073Complete404.5248.0XP_074620506.1uncharacterized protein LOC116305772JBrowse
646at6073Duplicated235.4156.0XP_074637572.1uncharacterized protein LOC114976257 isoform X1JBrowse
646at6073Duplicated235.0155.0XP_074637573.1uncharacterized protein LOC114976257 isoform X1JBrowse
671at6073Complete325.7142.0XP_074636292.1Thioredoxin-like 4AJBrowse
686at6073Duplicated1385.0958.0XP_074623845.1reversion-inducing cysteine-rich protein with Kazal motifs-likeJBrowse
686at6073Duplicated1385.0958.0XP_074623846.1reversion-inducing cysteine-rich protein with Kazal motifs-likeJBrowse
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