BUSCO Gene Details in Alatina alata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Alatina alataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 6.4% [S: 6.1%, D: 0.2%] F: 6.2%, M: 87.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
204 (6.4%)196 (6.1%)8 (0.2%)197 (6.2%)2,802 (87.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Alatina alata: 409 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3139at6073Fragmented207.6231THUMP domain-containing 3
3172at6073Fragmented512.471PR domain zinc finger protein 12
3663at6073Fragmented481.1336Peripheral plasma membrane CASK
3691at6073Complete529.0344Soluble calcium-activated nucleotidase 1
3818at6073Complete478.6463F-box/LRR-repeat protein 20
3911at6073Fragmented111.8428Gamma-tubulin complex component 4
4064at6073Fragmented434.5289T-box transcription factor TBX3-like
4958at6073Complete92.471cAMP-regulated phosphoprotein 19
4972at6073Fragmented119.087glyoxalase 3-like
5063at6073Complete539.2304mitoferrin-1
5475at6073Complete249.4183ATP synthase subunit C lysine N-methyltransferase-like
5560at6073Fragmented315.1223snRNA-activating protein complex subunit 3
5670at6073Fragmented237.0171MIT domain-containing protein 1
5762at6073Complete435.1266ribonuclease H2 subunit A
6132at6073Complete232.7162tRNA-specific adenosine deaminase 2
6330at6073Complete800.1465ER degradation-enhancing alpha-mannosidase-like protein 2
6358at6073Fragmented331.6188dual specificity mitogen-activated protein kinase kinase 1
6371at6073Complete389.4193NADH-ubiquinone oxidoreductase subunit 8
6410at6073Fragmented566.9379ubiquitin-protein ligase E3A
6836at6073Complete683.5501ATP-dependent RNA helicase DDX41
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