BUSCO Gene Details in Orbicella faveolata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Orbicella faveolataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.6% [S: 72.7%, D: 16.8%] F: 8.5%, M: 1.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,869 (89.6%)2,330 (72.7%)539 (16.8%)273 (8.5%)61 (1.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Orbicella faveolata: 3,961 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
540at6073Duplicated676.8339.0XP_020609403.1WD repeat domain phosphoinositide-interacting protein 3JBrowse
548at6073Duplicated491.3279.0XP_020630139.1ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase-likeJBrowse
548at6073Duplicated491.2279.0XP_020630137.1ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase-likeJBrowse
548at6073Duplicated491.2279.0XP_020630138.1ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase-likeJBrowse
598at6073Complete388.5211.0XP_020613254.1N-alpha-acetyltransferase 60JBrowse
599at6073Complete214.5114.0XP_020609563.1guanine nucleotide exchange factor MSS4JBrowse
614at6073Complete732.7417.0XP_020617159.1F-box only protein 42JBrowse
625at6073Duplicated336.2190.0XP_020623618.1regulator of G-protein signaling 19JBrowse
625at6073Duplicated331.9187.0XP_020623619.1regulator of G-protein signaling 19JBrowse
625at6073Duplicated325.6179.0XP_020623620.1regulator of G-protein signaling 19JBrowse
625at6073Duplicated325.6179.0XP_020623621.1regulator of G-protein signaling 19JBrowse
635at6073Complete349.9264.0XP_020618816.1START domain-containing protein 10JBrowse
639at6073Complete404.4248.0XP_020618898.1uncharacterized protein LOC116305772JBrowse
646at6073Complete262.1157.0XP_020607767.1uncharacterized protein LOC114976257 isoform X1JBrowse
671at6073Complete322.0142.0XP_020614484.1Thioredoxin-like 4AJBrowse
686at6073Fragmented941.2551.0XP_020632006.1reversion-inducing cysteine-rich protein with Kazal motifs-likeJBrowse
757at6073Duplicated296.9202.0XP_020607758.12-aminoethanethiol dioxygenase-likeJBrowse
757at6073Duplicated296.2202.0XP_020607757.12-aminoethanethiol dioxygenase-likeJBrowse
757at6073Duplicated280.6180.0XP_020607759.12-aminoethanethiol dioxygenase-likeJBrowse
765at6073Complete474.4342.0XP_020628449.1zinc finger Y-chromosomal 2-likeJBrowse
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