BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
227at6073Complete693.4313.0ENSORFP00005014531.1guanine nucleotide-binding protein subunit beta-2-like 1JBrowse
232at6073Complete660.2362.0ENSORFP00005007422.1zinc finger protein ZIC 4JBrowse
233at6073Duplicated228.4217.0ENSORFP00005007989.1uncharacterized protein LOC116298145JBrowse
233at6073Duplicated228.4217.0ENSORFP00005030759.1uncharacterized protein LOC116298145JBrowse
233at6073Duplicated228.4217.0ENSORFP00005031300.1uncharacterized protein LOC116298145JBrowse
233at6073Duplicated214.2209.0ENSORFP00005031293.1uncharacterized protein LOC116298145JBrowse
302at6073Complete163.5273.0ENSORFP00005000994.1vesicular integral-membrane protein VIP36-likeJBrowse
314at6073Complete197.7100.0ENSORFP00005003544.1enhancer of rudimentary homologJBrowse
321at6073Complete334.5179.0ENSORFP00005023812.1vacuolar protein-sorting-associated protein 25JBrowse
369at6073Complete471.5214.0ENSORFP00005024042.160S ribosomal protein L10-like proteinJBrowse
379at6073Duplicated495.0271.0ENSORFP00005011946.1uridylate-specific endoribonuclease BJBrowse
379at6073Duplicated493.5270.0ENSORFP00005011933.1uridylate-specific endoribonuclease BJBrowse
524at6073Complete235.8117.0ENSORFP00005036155.1Ubiquitin-like domainJBrowse
533at6073Duplicated376.2243.0ENSORFP00005029818.1somatomedin-B and thrombospondin type-1 domain-containing proteinJBrowse
533at6073Duplicated376.2243.0ENSORFP00005041546.1somatomedin-B and thrombospondin type-1 domain-containing proteinJBrowse
533at6073Duplicated376.2243.0ENSORFP00005052644.1somatomedin-B and thrombospondin type-1 domain-containing proteinJBrowse
540at6073Duplicated741.0339.0ENSORFP00005043322.1WD repeat domain phosphoinositide-interacting protein 3JBrowse
540at6073Duplicated741.0339.0ENSORFP00005044421.1WD repeat domain phosphoinositide-interacting protein 3JBrowse
540at6073Duplicated639.4306.0ENSORFP00005043333.1WD repeat domain phosphoinositide-interacting protein 3JBrowse
540at6073Duplicated639.4306.0ENSORFP00005044415.1WD repeat domain phosphoinositide-interacting protein 3JBrowse
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